CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSCSAG00000003894
(
Chlorocebus sabaeus
)
THAP finger
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF05485 (THAP)
IPR006612
ENSCSAG00000003894
T348240_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
THAP12
M02538_2.00
Homo sapiens
NNNYMBNNBGRN
NYCVNNVKRNNN
PBM
Weirauch et al.(2014)
pTH9190
1.000
1.000
THAP12
M02539_2.00
Gallus gallus
NBNYCKGKMNNN
NNNKMCMGRNVN
PBM
Weirauch et al.(2014)
pTH8688
0.937
0.937
prkrirb
M02536_2.00
Danio rerio
NNMCMGMSGGNN
NNCCSKCKGKNN
PBM
Weirauch et al.(2014)
pTH8319
0.899
0.899
prkrirb
M02540_2.00
Oryzias latipes
NNBBCCGGNHN
NDNCCGGVVNN
PBM
Weirauch et al.(2014)
pTH9383
0.848
0.848
prkrirb
M02541_2.00
Tetraodon nigroviridis
CCCGCGGG
CCCGCGGG
PBM
Weirauch et al.(2014)
pTH8574
0.848
0.848
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCSAP00000000252
THAP finger
4
88
FCAAPNCTRKSTQSDLAFFRFPRDPARCQKWVENCRRADLEDKTPDQLNKHYRLCAKHFETSMICRTSPYRTVLRDNAIPTIFDL
Links
Other
THAP finger
family TFs
Other
Chlorocebus sabaeus
TFs
51 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00009p00175450
Amborella trichopoda
AMTR_s00009p00175450
I
0.000
cassava19334.valid.m1
Manihot esculenta
cassava19334.valid.m1
N
0.000
Eucgr.K00871
Eucalyptus grandis
Eucgr.K00871
N
0.000
evm.TU.supercontig_81.11
Carica papaya
evm.TU.supercontig_81.11
N
0.000
GLYMA12G34300
Glycine max
GLYMA12G34300
I
0.000
Gorai.002G081900
Gossypium raimondii
Gorai.002G081900
I
0.000
Gorai.013G164100
Gossypium raimondii
Gorai.013G164100
I
0.000
Lus10020069.g
Linum usitatissimum
Lus10020069.g
N
0.000
mgf012088m
Mimulus guttatus
mgf012088m
I
0.000
PGSC0003DMG400019263
Solanum tuberosum
PGSC0003DMG400019263
I
0.000
POPTR_0004s03190
Populus trichocarpa
POPTR_0004s03190
N
0.000
POPTR_0011s03360
Populus trichocarpa
POPTR_0011s03360
N
0.000
SapurV1A.0028s0330
Salix purpurea
SapurV1A.0028s0330
N
0.000
SELMODRAFT_405883
Selaginella moellendorffii
SELMODRAFT_405883
I
0.000
SELMODRAFT_431241
Selaginella moellendorffii
SELMODRAFT_431241
I
0.000
Solyc07g064040.2
Solanum lycopersicum
Solyc07g064040.2
I
0.000
VIT_19s0014g05100
Vitis vinifera
VIT_19s0014g05100
N
0.000