Bostr.0556s0088 (Boechera stricta)
Whirly

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF08536 (Whirly) IPR013742 Bostr.0556s0088 T350613_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.0556s0088.1.p Whirly 92 228

Links

Other Whirly family TFs
Other Boechera stricta TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27950.m000105 Ricinus communis 27950.m000105 I
28649.m000212 Ricinus communis 28649.m000212 I
30170.m014236 Ricinus communis 30170.m014236 I
CUC2 Arabidopsis lyrata Al_scaffold_0008_1815 I
AMTR_s00010p00266320 Amborella trichopoda AMTR_s00010p00266320 I
AMTR_s00058p00136280 Amborella trichopoda AMTR_s00058p00136280 I
Aquca_002_00662 Aquilegia coerulea Aquca_002_00662 I
Aquca_007_00948 Aquilegia coerulea Aquca_007_00948 I
Aquca_033_00035 Aquilegia coerulea Aquca_033_00035 I
NAC59 Arabidopsis thaliana AT3G29035 D
NAC079 Arabidopsis thaliana AT5G07680 D
NAC92 Arabidopsis thaliana AT5G39610 D
NAC098 Arabidopsis thaliana AT5G53950 D
NAC100 Arabidopsis thaliana AT5G61430 D
BGIOSGA008492 Oryza indica BGIOSGA008492 I
BGIOSGA016546 Oryza indica BGIOSGA016546 I
BGIOSGA022861 Oryza indica BGIOSGA022861 I
BGIOSGA026695 Oryza indica BGIOSGA026695 I
BGIOSGA029508 Oryza indica BGIOSGA029508 I
Bo00578s090 Brassica oleracea Bo00578s090 I
Bo2g043280 Brassica oleracea Bo2g043280 I
Bo2g089890 Brassica oleracea Bo2g089890 I
Bo2g161570 Brassica oleracea Bo2g161570 I
Bo6g062160 Brassica oleracea Bo6g062160 I
Bo6g120460 Brassica oleracea Bo6g120460 I
Bo7g098620 Brassica oleracea Bo7g098620 I
Bo9g113820 Brassica oleracea Bo9g113820 I
Bo9g157320 Brassica oleracea Bo9g157320 I
Bostr.10058s0039 Boechera stricta Bostr.10058s0039 I
Bostr.13129s0198 Boechera stricta Bostr.13129s0198 I
Bostr.26833s0095 Boechera stricta Bostr.26833s0095 I
Bostr.26833s0880 Boechera stricta Bostr.26833s0880 I
Bra002148 Brassica rapa Bra002148 I
Bra003023 Brassica rapa Bra003023 I
Bra008259 Brassica rapa Bra008259 I
Bra012960 Brassica rapa Bra012960 I
Bra015750 Brassica rapa Bra015750 I
Bra022685 Brassica rapa Bra022685 I
Bra025374 Brassica rapa Bra025374 I
Bra025658 Brassica rapa Bra025658 I
Bra028435 Brassica rapa Bra028435 I
Bra028685 Brassica rapa Bra028685 I
Bra029313 Brassica rapa Bra029313 I
Bra036223 Brassica rapa Bra036223 I
BRADI3G46900 Brachypodium distachyon BRADI3G46900 I
BRADI5G12407 Brachypodium distachyon BRADI5G12407 I
Cagra.0542s0037 Capsella grandiflora Cagra.0542s0037 I
Cagra.2925s0018 Capsella grandiflora Cagra.2925s0018 I
Cagra.4622s0005 Capsella grandiflora Cagra.4622s0005 I
Cagra.6981s0001 Capsella grandiflora Cagra.6981s0001 I
Carubv10001372m.g Capsella rubella Carubv10001372m.g I
Carubv10005201m.g Capsella rubella Carubv10005201m.g I
Carubv10017737m.g Capsella rubella Carubv10017737m.g I
Carubv10026752m.g Capsella rubella Carubv10026752m.g I
Carubv10028330m.g Capsella rubella Carubv10028330m.g I
cassava1757.valid.m1 Manihot esculenta cassava1757.valid.m1 I
cassava1758.valid.m1 Manihot esculenta cassava1758.valid.m1 I
cassava21054.m1 Manihot esculenta cassava21054.m1 I
cassava21580.m1 Manihot esculenta cassava21580.m1 I
cassava361.valid.m1 Manihot esculenta cassava361.valid.m1 I
cassava44869.m1 Manihot esculenta cassava44869.m1 I
Ca_22370 Cicer arietinum Ca_22370 I
Ca_22532 Cicer arietinum Ca_22532 I
chr1.CM0141.310.nc Lotus japonicus chr1.CM0141.310.nc I
chr3.CM0282.730.nc Lotus japonicus chr3.CM0282.730.nc I
chr4.CM0087.800.nd Lotus japonicus chr4.CM0087.800.nd I
Ciclev10001403m.g Citrus clementina Ciclev10001403m.g I
Ciclev10008619m.g Citrus clementina Ciclev10008619m.g I
Ciclev10012093m.g Citrus clementina Ciclev10012093m.g I
Cla010484 Citrullus lanatus Cla010484 I
Cla017258 Citrullus lanatus Cla017258 I
Cla019391 Citrullus lanatus Cla019391 I
Cla023717 Citrullus lanatus Cla023717 I
Cla023834 Citrullus lanatus Cla023834 I
Cucsa.122890 Cucumis sativus Cucsa.122890 I
Cucsa.197830 Cucumis sativus Cucsa.197830 I
Cucsa.272370 Cucumis sativus Cucsa.272370 I
estExt_gwp_gw1.C_460173 Physcomitrella patens estExt_gwp_gw1.C_460173 I
Eucgr.B00529 Eucalyptus grandis Eucgr.B00529 I
Eucgr.F03588 Eucalyptus grandis Eucgr.F03588 I
Eucgr.I01958 Eucalyptus grandis Eucgr.I01958 I
evm.TU.supercontig_111.22 Carica papaya evm.TU.supercontig_111.22 I
evm.TU.supercontig_131.88 Carica papaya evm.TU.supercontig_131.88 I
evm.TU.supercontig_286.12 Carica papaya evm.TU.supercontig_286.12 I
e_gw1.159.34.1 Physcomitrella patens e_gw1.159.34.1 D
e_gw1.227.43.1 Physcomitrella patens e_gw1.227.43.1 I
e_gw1.288.15.1 Physcomitrella patens e_gw1.288.15.1 D
e_gw1.327.11.1 Physcomitrella patens e_gw1.327.11.1 D
F775_32832 Aegilops tauschii F775_32832 N
ATNAC3 Arabidopsis lyrata fgenesh2_kg.5__665__AT3G29035.1 I
ANAC080 Arabidopsis lyrata fgenesh2_kg.6__736__AT5G07680.1 D
ATNAC2 Arabidopsis lyrata fgenesh2_kg.7__3461__AT5G39610.1 I
ANAC100 Arabidopsis lyrata fgenesh2_kg.8__2118__AT5G61430.1 D
gene00971-v1.0-hybrid Fragaria vesca gene00971-v1.0-hybrid I
gene04424-v1.0-hybrid Fragaria vesca gene04424-v1.0-hybrid I
gene31474-v1.0-hybrid Fragaria vesca gene31474-v1.0-hybrid I
GLYMA04G33270 Glycine max GLYMA04G33270 I
GLYMA05G00930 Glycine max GLYMA05G00930 I
GLYMA06G21020 Glycine max GLYMA06G21020 I
GLYMA06G35660 Glycine max GLYMA06G35660 I
GLYMA09G37050 Glycine max GLYMA09G37050 I
GLYMA12G26190 Glycine max GLYMA12G26190 I
GLYMA13G05540 Glycine max GLYMA13G05540 I
GLYMA17G10970 Glycine max GLYMA17G10970 I
GLYMA18G49620 Glycine max GLYMA18G49620 I
GLYMA19G02850 Glycine max GLYMA19G02850 I
Gorai.002G067300 Gossypium raimondii Gorai.002G067300 I
Gorai.002G113300 Gossypium raimondii Gorai.002G113300 I
Gorai.007G038100 Gossypium raimondii Gorai.007G038100 I
Gorai.007G079900 Gossypium raimondii Gorai.007G079900 I
Gorai.007G323900 Gossypium raimondii Gorai.007G323900 I
Gorai.008G194400 Gossypium raimondii Gorai.008G194400 I
Gorai.009G186000 Gossypium raimondii Gorai.009G186000 I
Gorai.013G171300 Gossypium raimondii Gorai.013G171300 I
GRMZM2G009892 Zea mays GRMZM2G009892 I
GRMZM2G386163 Zea mays GRMZM2G386163 I
GRMZM2G393433 Zea mays GRMZM2G393433 I
GRMZM2G430522 Zea mays GRMZM2G430522 I
GRMZM5G898290 Zea mays GRMZM5G898290 N
GSMUA_Achr10G22350_001 Musa acuminata GSMUA_Achr10G22350_001 I
GSMUA_Achr6G08600_001 Musa acuminata GSMUA_Achr6G08600_001 I
LjSGA_071377.1 Lotus japonicus LjSGA_071377.1 I
LPERR02G17680 Leersia perrieri LPERR02G17680 N
LPERR04G11740 Leersia perrieri LPERR04G11740 I
LPERR06G12840 Leersia perrieri LPERR06G12840 I
LPERR08G17020 Leersia perrieri LPERR08G17020 I
LPERR09G11330 Leersia perrieri LPERR09G11330 I
Lus10005537.g Linum usitatissimum Lus10005537.g I
Lus10013205.g Linum usitatissimum Lus10013205.g I
Lus10030723.g Linum usitatissimum Lus10030723.g I
Lus10041924.g Linum usitatissimum Lus10041924.g I
MDP0000129335 Malus domestica MDP0000129335 I
MDP0000135860 Malus domestica MDP0000135860 I
MDP0000232050 Malus domestica MDP0000232050 I
MDP0000276765 Malus domestica MDP0000276765 I
MDP0000310981 Malus domestica MDP0000310981 I
mgf003818m Mimulus guttatus mgf003818m I
mgf023466m Mimulus guttatus mgf023466m I
mgf023988m Mimulus guttatus mgf023988m I
MLOC_13932 Hordeum vulgare MLOC_13932 I
MTR_2g078700 Medicago truncatula MTR_2g078700 I
MTR_3g070030 Medicago truncatula MTR_3g070030 I
MTR_3g435150 Medicago truncatula MTR_3g435150 I
MTR_6g012670 Medicago truncatula MTR_6g012670 I
OB02G29280 Oryza brachyantha OB02G29280 N
OB06G22100 Oryza brachyantha OB06G22100 I
OB08G27000 Oryza brachyantha OB08G27000 I
OB09G21720 Oryza brachyantha OB09G21720 I
OBART02G21850 Oryza barthii OBART02G21850 I
OBART04G14970 Oryza barthii OBART04G14970 I
OBART06G13940 Oryza barthii OBART06G13940 I
OBART09G15220 Oryza barthii OBART09G15220 I
OGLUM02G22030 Oryza glumaepatula OGLUM02G22030 I
OGLUM04G14830 Oryza glumaepatula OGLUM04G14830 I
OGLUM06G14810 Oryza glumaepatula OGLUM06G14810 I
OGLUM08G21360 Oryza glumaepatula OGLUM08G21360 I
OGLUM09G15820 Oryza glumaepatula OGLUM09G15820 I
OLONG_008218 Oryza longistaminata OLONG_008218 I
OLONG_009674 Oryza longistaminata OLONG_009674 I
OLONG_019251 Oryza longistaminata OLONG_019251 I
OMERI02G21390 Oryza meridionalis OMERI02G21390 I
OMERI07G04410 Oryza meridionalis OMERI07G04410 I
ONIVA02G24080 Oryza nivara ONIVA02G24080 I
ONIVA03G33370 Oryza nivara ONIVA03G33370 I
ONIVA04G13100 Oryza nivara ONIVA04G13100 I
ONIVA08G22710 Oryza nivara ONIVA08G22710 I
ONIVA09G15800 Oryza nivara ONIVA09G15800 I
OPUNC02G19580 Oryza punctata OPUNC02G19580 I
OPUNC04G12870 Oryza punctata OPUNC04G12870 I
OPUNC06G13130 Oryza punctata OPUNC06G13130 I
OPUNC08G18240 Oryza punctata OPUNC08G18240 I
OPUNC09G13640 Oryza punctata OPUNC09G13640 I
orange1.1g016283m.g Citrus sinensis orange1.1g016283m.g I
orange1.1g018950m.g Citrus sinensis orange1.1g018950m.g I
orange1.1g047710m.g Citrus sinensis orange1.1g047710m.g I
ORGLA04G0119700 Oryza glaberrima ORGLA04G0119700 I
ORGLA06G0124600 Oryza glaberrima ORGLA06G0124600 I
ORGLA08G0177600 Oryza glaberrima ORGLA08G0177600 I
ORGLA09G0117400 Oryza glaberrima ORGLA09G0117400 I
ORUFI02G22930 Oryza rufipogon ORUFI02G22930 I
ORUFI04G16370 Oryza rufipogon ORUFI04G16370 I
ORUFI06G14810 Oryza rufipogon ORUFI06G14810 I
ORUFI08G22550 Oryza rufipogon ORUFI08G22550 I
ORUFI09G16430 Oryza rufipogon ORUFI09G16430 I
OS02G0579000 Oryza sativa OS02G0579000 I
OS04G0460600 Oryza sativa OS04G0460600 I
OS06G0344900 Oryza sativa OS06G0344900 I
OS08G0511200 Oryza sativa OS08G0511200 I
OS09G0497900 Oryza sativa OS09G0497900 I
Pavir.Fa00294 Panicum virgatum Pavir.Fa00294 I
Pavir.Fa00438 Panicum virgatum Pavir.Fa00438 I
Pavir.Fb01938 Panicum virgatum Pavir.Fb01938 I
Pavir.Gb01850 Panicum virgatum Pavir.Gb01850 I
Pavir.J00978 Panicum virgatum Pavir.J00978 I
Pavir.J02772 Panicum virgatum Pavir.J02772 I
Pavir.J23199 Panicum virgatum Pavir.J23199 I
PK13860.1 Cannabis sativa PK13860.1 I
PK26741.1 Cannabis sativa PK26741.1 I
Pm011397 Prunus mume Pm011397 I
Pm015914 Prunus mume Pm015914 I
Pm022916 Prunus mume Pm022916 I
Pm024887 Prunus mume Pm024887 I
POPTR_0001s40680 Populus trichocarpa POPTR_0001s40680 I
POPTR_0002s00730 Populus trichocarpa POPTR_0002s00730 I
POPTR_0005s27720 Populus trichocarpa POPTR_0005s27720 I
POPTR_0011s11600 Populus trichocarpa POPTR_0011s11600 I
PRUPE_ppa007653mg Prunus persica PRUPE_ppa007653mg I
PRUPE_ppa007883mg Prunus persica PRUPE_ppa007883mg I
PRUPE_ppa026810mg Prunus persica PRUPE_ppa026810mg I
SapurV1A.0016s0340 Salix purpurea SapurV1A.0016s0340 I
SapurV1A.0207s0120 Salix purpurea SapurV1A.0207s0120 I
SapurV1A.0266s0070 Salix purpurea SapurV1A.0266s0070 I
SapurV1A.1325s0010 Salix purpurea SapurV1A.1325s0010 I
SapurV1A.2059s0010 Salix purpurea SapurV1A.2059s0010 I
Sb02g028870 Sorghum bicolor Sb02g028870 I
Sb06g019010 Sorghum bicolor Sb06g019010 I
Sb07g027650 Sorghum bicolor Sb07g027650 I
Sb08g006330 Sorghum bicolor Sb08g006330 I
Si007886m.g Setaria italica Si007886m.g I
Si010553m.g Setaria italica Si010553m.g I
Si015498m.g Setaria italica Si015498m.g I
Si017567m.g Setaria italica Si017567m.g N
Si030187m.g Setaria italica Si030187m.g I
Solyc07g062840.2 Solanum lycopersicum Solyc07g062840.2 I
TCM_014073 Theobroma cacao TCM_014073 I
TCM_018621 Theobroma cacao TCM_018621 I
TCM_031619 Theobroma cacao TCM_031619 I
TCM_034835 Theobroma cacao TCM_034835 I
Thhalv10004550m.g Eutrema salsugineum Thhalv10004550m.g I
Thhalv10004583m.g Eutrema salsugineum Thhalv10004583m.g I
Thhalv10013863m.g Eutrema salsugineum Thhalv10013863m.g I
Thhalv10014081m.g Eutrema salsugineum Thhalv10014081m.g I
Thhalv10019493m.g Eutrema salsugineum Thhalv10019493m.g I
Thhalv10027874m.g Eutrema salsugineum Thhalv10027874m.g I
Traes_2AL_57BF37A86 Triticum aestivum Traes_2AL_57BF37A86 N
Traes_2BL_6AEE8AC28 Triticum aestivum Traes_2BL_6AEE8AC28 N
Traes_2DL_DF7B995C9 Triticum aestivum Traes_2DL_DF7B995C9 N
Traes_5BL_657BF1497 Triticum aestivum Traes_5BL_657BF1497 I
TRIUR3_09915 Triticum urartu TRIUR3_09915 N
VIT_14s0108g01070 Vitis vinifera VIT_14s0108g01070 I
CUC3 Vitis vinifera VIT_18s0122g00800 I
VIT_19s0014g02200 Vitis vinifera VIT_19s0014g02200 I