TCM_005483 (Theobroma cacao)
WRC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF08879 (WRC) IPR014977 TCM_005483 T351301_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GRF9
M07370_2.00 		Arabidopsis thaliana
NTGTCAGANNHNNVH
DBNNDNNTCTGACAN		 Dap-seq
OMalley et al.(2016)
GRF9_col_a 		0.718 0.718
GRF9
M07371_2.00 		Arabidopsis thaliana
TGTCAGAN
NTCTGACA		 Dap-seq
OMalley et al.(2016)
GRF9_colamp_a 		0.718 0.718
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOX96174 WRC 144 186
EOX96174 WRC 343 384

Links

Other WRC family TFs
Other Theobroma cacao TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R008654 Calypte anna Aan_R008654 I
Afo_R011067 Aptenodytes forsteri Afo_R011067 I
Alligator_sinensis_CCG012513.1 Alligator sinensis Alligator_sinensis_CCG012513.1 I
Brh_R007685 Buceros rhinoceros Brh_R007685 I
Cmyd_10007196 Chelonia mydas Cmyd_10007196 I
PRDM4 Anolis carolinensis ENSACAG00000014907 I
ENSAMEG00000016174 Ailuropoda melanoleuca ENSAMEG00000016174 I
ENSAPLG00000009846 Anas platyrhynchos ENSAPLG00000009846 I
PRDM4 Bos taurus ENSBTAG00000012999 I
PRDM4 Canis familiaris ENSCAFG00000001788 I
PRDM4 Choloepus hoffmanni ENSCHOG00000001744 I
PRDM4 Callithrix jacchus ENSCJAG00000015261 I
ENSCPOG00000022385 Cavia porcellus ENSCPOG00000022385 I
ENSCSAG00000002896 Chlorocebus sabaeus ENSCSAG00000002896 I
PRDM4 Dasypus novemcinctus ENSDNOG00000032478 I
PRDM4 Equus caballus ENSECAG00000015423 I
PRDM4 Erinaceus europaeus ENSEEUG00000006569 I
ENSFALG00000013342 Ficedula albicollis ENSFALG00000013342 I
PRDM4 Felis catus ENSFCAG00000022478 I
PRDM4 Homo sapiens ENSG00000110851 D
PRDM4 Gallus gallus ENSGALG00000012619 I
PRDM4 Gorilla gorilla ENSGGOG00000001244 I
PRDM4 Loxodonta africana ENSLAFG00000001483 I
ENSMEUG00000004495 Macropus eugenii ENSMEUG00000004495 I
PRDM4 Meleagris gallopavo ENSMGAG00000012815 I
PRDM4 Microcebus murinus ENSMICG00000007807 I
PRDM4 Myotis lucifugus ENSMLUG00000000767 I
PRDM4 Macaca mulatta ENSMMUG00000015550 I
PRDM4 Monodelphis domestica ENSMODG00000001448 I
ENSMPUG00000012238 Mustela putorius furo ENSMPUG00000012238 I
ENSNLEG00000006748 Nomascus leucogenys ENSNLEG00000006748 I
PRDM4 Ornithorhynchus anatinus ENSOANG00000005526 I
ENSOARG00000017955 Ovis aries ENSOARG00000017955 I
PRDM4 Otolemur garnettii ENSOGAG00000011945 I
PRDM4 Ochotona princeps ENSOPRG00000010192 I
ENSP00000228437 Macaca fascicularis ENSP00000228437 I
ENSP00000228437-D1 Bos grunniens ENSP00000228437-D1 I
ENSPANG00000022084 Papio anubis ENSPANG00000022084 I
PRDM4 Procavia capensis ENSPCAG00000009987 I
ENSPPYG00000004913 Pongo abelii ENSPPYG00000004913 I
ENSPSIG00000012066 Pelodiscus sinensis ENSPSIG00000012066 I
PRDM4 Pan troglodytes ENSPTRG00000005400 I
Prdm4 Rattus norvegicus ENSRNOG00000004962 I
PRDM4 Sus scrofa ENSSSCG00000000160 I
ENSSTOG00000016168 Ictidomys tridecemlineatus ENSSTOG00000016168 I
ENSTGUG00000010962 Taeniopygia guttata ENSTGUG00000010962 I
ENSTGUG00000015149 Taeniopygia guttata ENSTGUG00000015149 I
PRDM4 Tursiops truncatus ENSTTRG00000011056 I
PRDM4 Vicugna pacos ENSVPAG00000002215 I
Gfo_R004636 Geospiza fortis Gfo_R004636 I
Myotis_brandtii_PRDM4_10020406 Myotis brandtii Myotis_brandtii_PRDM4_10020406 I
Pvit_09756 Pogona vitticeps Pvit_09756 I
Tal_R009708 Tyto alba Tal_R009708 I