Pavir.Da01847 (Panicum virgatum)
WRC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF08879 (WRC) IPR014977 Pavir.Da01847 T351722_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AtGRF6
M02545_2.00 		Arabidopsis thaliana
NNNNYDNN
NNHRNNNN		 PBM
Weirauch et al.(2014)
pTH7356 		0.721 0.721
AtGRF6
M07369_2.00 		Arabidopsis thaliana
NNNNNHNTGTCAGA
TCTGACANDNNNNN		 Dap-seq
OMalley et al.(2016)
AtGRF6_col_a 		0.721 0.721
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Da01847.1.p WRC 86 128

Links

Other WRC family TFs
Other Panicum virgatum TFs

527 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA026544 Oryza indica BGIOSGA026544 N 0.000
BGIOSGA026545 Oryza indica BGIOSGA026545 N 0.000
DREB1H Oryza indica BGIOSGA029416 I 0.000
DREB1B Oryza indica BGIOSGA029417 N 0.000
BRADI1G49570 Brachypodium distachyon BRADI1G49570 I 0.000
BRADI4G35630 Brachypodium distachyon BRADI4G35630 I 0.000
BRADI4G35650 Brachypodium distachyon BRADI4G35650 I 0.000
F775_00827 Aegilops tauschii F775_00827 I 0.000
F775_27111 Aegilops tauschii F775_27111 I 0.000
GRMZM2G069126 Zea mays GRMZM2G069126 I 0.000
GRMZM2G069146 Zea mays GRMZM2G069146 I 0.000
GRMZM2G124011 Zea mays GRMZM2G124011 I 0.000
GRMZM2G175856 Zea mays GRMZM2G175856 N 0.000
LPERR09G12950 Leersia perrieri LPERR09G12950 I 0.000
OGLUM08G23770 Oryza glumaepatula OGLUM08G23770 N 0.000
OGLUM09G17420 Oryza glumaepatula OGLUM09G17420 I 0.000
OMERI09G12480 Oryza meridionalis OMERI09G12480 I 0.000
ONIVA09G17880 Oryza nivara ONIVA09G17880 N 0.000
ONIVA09G17890 Oryza nivara ONIVA09G17890 I 0.000
OPUNC09G15260 Oryza punctata OPUNC09G15260 I 0.000
OPUNC09G15280 Oryza punctata OPUNC09G15280 I 0.000
ORGLA08G0220100 Oryza glaberrima ORGLA08G0220100 I 0.000
ORGLA08G0220200 Oryza glaberrima ORGLA08G0220200 N 0.000
ORGLA09G0133000 Oryza glaberrima ORGLA09G0133000 N 0.000
ORGLA09G0133100 Oryza glaberrima ORGLA09G0133100 I 0.000
ORUFI09G18190 Oryza rufipogon ORUFI09G18190 N 0.000
ORUFI09G18200 Oryza rufipogon ORUFI09G18200 I 0.000
DREB1H Oryza sativa OS09G0522100 I 0.000
Pavir.Ba01281 Panicum virgatum Pavir.Ba01281 I 0.000
Pavir.Fa00114 Panicum virgatum Pavir.Fa00114 N 0.000
Pavir.J03892 Panicum virgatum Pavir.J03892 I 0.000
Pavir.J03893 Panicum virgatum Pavir.J03893 I 0.000
Pavir.J27101 Panicum virgatum Pavir.J27101 I 0.000
Pavir.J32829 Panicum virgatum Pavir.J32829 N 0.000
Sb02g030320 Sorghum bicolor Sb02g030320 I 0.000
Sb02g030330 Sorghum bicolor Sb02g030330 I 0.000
Sb02g030340 Sorghum bicolor Sb02g030340 I 0.000
Sb05g006275 Sorghum bicolor Sb05g006275 I 0.000
Si031001m.g Setaria italica Si031001m.g I 0.000
Traes_5BL_5299B6B33 Triticum aestivum Traes_5BL_5299B6B33 N 0.000
Traes_5BL_D16B19610 Triticum aestivum Traes_5BL_D16B19610 I 0.000