Sb02g030340 (Sorghum bicolor)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Sb02g030340 T004972_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1A
M09710_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1A_01 		0.841 0.887
DREB1A
M09711_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$SED_Q2 		0.841 0.887
Q8GZQ2_MAIZE
M09720_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1A_02 		0.748 0.811
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb02g030340.1 AP2 59 112

Links

Other AP2 family TFs
Other Sorghum bicolor TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sb02g030330 Sorghum bicolor Sb02g030330 I 0.898
Sb02g030320 Sorghum bicolor Sb02g030320 I 0.890
Si031001m.g Setaria italica Si031001m.g I 0.890
Pavir.J27101 Panicum virgatum Pavir.J27101 I 0.890
LPERR09G12950 Leersia perrieri LPERR09G12950 I 0.887
Sb05g006275 Sorghum bicolor Sb05g006275 I 0.881
Pavir.J03893 Panicum virgatum Pavir.J03893 I 0.879
Pavir.J03892 Panicum virgatum Pavir.J03892 I 0.874
BRADI4G35650 Brachypodium distachyon BRADI4G35650 I 0.863
GRMZM2G069146 Zea mays GRMZM2G069146 I 0.845
Si030998m.g Setaria italica Si030998m.g I 0.845
Pavir.J03891 Panicum virgatum Pavir.J03891 I 0.845
DREB1A Oryza indica BGIOSGA029415 I 0.841
OBART09G16810 Oryza barthii OBART09G16810 I 0.841
OGLUM09G17430 Oryza glumaepatula OGLUM09G17430 I 0.841
OMERI09G12490 Oryza meridionalis OMERI09G12490 I 0.841
ONIVA09G17900 Oryza nivara ONIVA09G17900 I 0.841
OPUNC09G15290 Oryza punctata OPUNC09G15290 I 0.841
ORUFI09G18210 Oryza rufipogon ORUFI09G18210 I 0.841
DREB1A Oryza sativa OS09G0522200 D 0.841
Pavir.Ba01280 Panicum virgatum Pavir.Ba01280 I 0.840
GRMZM2G124011 Zea mays GRMZM2G124011 I 0.836
GRMZM2G069126 Zea mays GRMZM2G069126 I 0.833
ORGLA08G0220100 Oryza glaberrima ORGLA08G0220100 I 0.821
Pavir.Ba01281 Panicum virgatum Pavir.Ba01281 I 0.820
F775_27111 Aegilops tauschii F775_27111 I 0.811
Traes_5BL_D16B19610 Triticum aestivum Traes_5BL_D16B19610 I 0.811
OBART09G16830 Oryza barthii OBART09G16830 I 0.766
Q8GZQ2_MAIZE Zea mays Q8GZQ2_MAIZE D 0.748
GRMZM2G124037 Zea mays GRMZM2G124037 I 0.746
OPUNC09G15260 Oryza punctata OPUNC09G15260 I 0.744
GRMZM2G069082 Zea mays GRMZM2G069082 I 0.739
Pavir.Fb02246 Panicum virgatum Pavir.Fb02246 I 0.731
Pavir.Fa00114 Panicum virgatum Pavir.Fa00114 N 0.716
Traes_5BL_5299B6B33 Triticum aestivum Traes_5BL_5299B6B33 N 0.711
BRADI4G35610 Brachypodium distachyon BRADI4G35610 I 0.710
GRMZM2G175856 Zea mays GRMZM2G175856 N 0.708
Pavir.J32829 Panicum virgatum Pavir.J32829 N 0.708
Sb07g025210 Sorghum bicolor Sb07g025210 N 0.702
Sb02g030300 Sorghum bicolor Sb02g030300 I 0.693
Traes_5BL_0C3609EF0 Triticum aestivum Traes_5BL_0C3609EF0 N 0.680
OMERI09G12480 Oryza meridionalis OMERI09G12480 I 0.679
OPUNC09G15280 Oryza punctata OPUNC09G15280 I 0.679