CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI4G35610
(
Brachypodium distachyon
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
BRADI4G35610
T001363_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q8GZQ2_MAIZE
M09720_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1A_02
0.735
0.774
DREB1A
M09710_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1A_01
0.708
0.755
DREB1A
M09711_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$SED_Q2
0.708
0.755
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI4G35610.1
AP2
43
96
PVYRGVRRRGSAGRWVCEVRVPGMRNKRLWLGTHLTAESAGRAHDAAMLALRGP
Links
Other
AP2
family TFs
Other
Brachypodium distachyon
TFs
47 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI4G35620
Brachypodium distachyon
BRADI4G35620
I
0.793
GRMZM2G069146
Zea mays
GRMZM2G069146
I
0.750
BRADI2G60340
Brachypodium distachyon
BRADI2G60340
I
0.747
GRMZM2G124037
Zea mays
GRMZM2G124037
I
0.739
BRADI3G57360
Brachypodium distachyon
BRADI3G57360
I
0.735
Q8GZQ2_MAIZE
Zea mays
Q8GZQ2_MAIZE
D
0.735
GRMZM2G069082
Zea mays
GRMZM2G069082
I
0.734
BRADI4G35580
Brachypodium distachyon
BRADI4G35580
I
0.733
BRADI4G35650
Brachypodium distachyon
BRADI4G35650
I
0.733
GRMZM2G069126
Zea mays
GRMZM2G069126
I
0.725
BRADI4G35590
Brachypodium distachyon
BRADI4G35590
N
0.723
OPUNC09G15260
Oryza punctata
OPUNC09G15260
I
0.722
MLOC_74460
Hordeum vulgare
MLOC_74460
I
0.721
Traes_5BL_60510E4A7
Triticum aestivum
Traes_5BL_60510E4A7
I
0.721
LPERR09G12950
Leersia perrieri
LPERR09G12950
I
0.720
Sb02g030320
Sorghum bicolor
Sb02g030320
I
0.720
Si031001m.g
Setaria italica
Si031001m.g
I
0.720
Pavir.J27101
Panicum virgatum
Pavir.J27101
I
0.720
Pavir.Ba01280
Panicum virgatum
Pavir.Ba01280
I
0.718
BRADI4G35570
Brachypodium distachyon
BRADI4G35570
N
0.717
F775_18881
Aegilops tauschii
F775_18881
N
0.714
Sb02g030330
Sorghum bicolor
Sb02g030330
I
0.714
Sb05g006275
Sorghum bicolor
Sb05g006275
I
0.712
Sb02g030340
Sorghum bicolor
Sb02g030340
I
0.710
Si030998m.g
Setaria italica
Si030998m.g
I
0.709
Pavir.J03891
Panicum virgatum
Pavir.J03891
I
0.709
DREB1A
Oryza indica
BGIOSGA029415
I
0.708
OBART09G16810
Oryza barthii
OBART09G16810
I
0.708
OGLUM09G17430
Oryza glumaepatula
OGLUM09G17430
I
0.708
OMERI09G12490
Oryza meridionalis
OMERI09G12490
I
0.708
ONIVA09G17900
Oryza nivara
ONIVA09G17900
I
0.708
OPUNC09G15290
Oryza punctata
OPUNC09G15290
I
0.708
ORUFI09G18210
Oryza rufipogon
ORUFI09G18210
I
0.708
DREB1A
Oryza sativa
OS09G0522200
D
0.708
Sb02g030310
Sorghum bicolor
Sb02g030310
I
0.706
Pavir.J03892
Panicum virgatum
Pavir.J03892
I
0.704
GRMZM2G124011
Zea mays
GRMZM2G124011
I
0.703
Pavir.Ba01281
Panicum virgatum
Pavir.Ba01281
I
0.703
OBART09G16830
Oryza barthii
OBART09G16830
I
0.700
Pavir.J03893
Panicum virgatum
Pavir.J03893
I
0.696
BRADI4G35600
Brachypodium distachyon
BRADI4G35600
N
0.690
Si030869m.g
Setaria italica
Si030869m.g
I
0.690
F775_27111
Aegilops tauschii
F775_27111
I
0.687
Traes_5BL_D16B19610
Triticum aestivum
Traes_5BL_D16B19610
I
0.687
ORGLA08G0220100
Oryza glaberrima
ORGLA08G0220100
I
0.686
BRADI1G57970
Brachypodium distachyon
BRADI1G57970
N
0.677
Traes_5BL_5299B6B33
Triticum aestivum
Traes_5BL_5299B6B33
N
0.677