OBART09G16830 (Oryza barthii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OBART09G16830 T003173_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q8GZQ2_MAIZE
M09720_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1A_02 		0.751 0.804
DREB1A
M09710_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1A_01 		0.738 0.922
DREB1A
M09711_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$SED_Q2 		0.738 0.922
Q8W236_WHEAT
M09724_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CBF1_02 		0.685 0.725
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART09G16830.1 AP2 32 83

Links

Other AP2 family TFs
Other Oryza barthii TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI4G35650 Brachypodium distachyon BRADI4G35650 I 0.780
Sb02g030320 Sorghum bicolor Sb02g030320 I 0.776
Si031001m.g Setaria italica Si031001m.g I 0.776
Pavir.J27101 Panicum virgatum Pavir.J27101 I 0.776
GRMZM2G124011 Zea mays GRMZM2G124011 I 0.773
GRMZM2G069146 Zea mays GRMZM2G069146 I 0.770
LPERR09G12950 Leersia perrieri LPERR09G12950 I 0.770
Sb02g030330 Sorghum bicolor Sb02g030330 I 0.770
Sb05g006275 Sorghum bicolor Sb05g006275 I 0.767
Sb02g030340 Sorghum bicolor Sb02g030340 I 0.766
GRMZM2G069126 Zea mays GRMZM2G069126 I 0.758
Pavir.Ba01281 Panicum virgatum Pavir.Ba01281 I 0.756
GRMZM2G124037 Zea mays GRMZM2G124037 I 0.755
Pavir.J03893 Panicum virgatum Pavir.J03893 I 0.752
Q8GZQ2_MAIZE Zea mays Q8GZQ2_MAIZE D 0.751
GRMZM2G069082 Zea mays GRMZM2G069082 I 0.750
Pavir.J03892 Panicum virgatum Pavir.J03892 I 0.750
OPUNC09G15260 Oryza punctata OPUNC09G15260 I 0.749
ORGLA08G0220100 Oryza glaberrima ORGLA08G0220100 I 0.743
DREB1A Oryza indica BGIOSGA029415 I 0.738
OBART09G16810 Oryza barthii OBART09G16810 I 0.738
OGLUM09G17430 Oryza glumaepatula OGLUM09G17430 I 0.738
OMERI09G12490 Oryza meridionalis OMERI09G12490 I 0.738
ONIVA09G17900 Oryza nivara ONIVA09G17900 I 0.738
OPUNC09G15290 Oryza punctata OPUNC09G15290 I 0.738
ORUFI09G18210 Oryza rufipogon ORUFI09G18210 I 0.738
DREB1A Oryza sativa OS09G0522200 D 0.738
F775_27111 Aegilops tauschii F775_27111 I 0.732
Si030998m.g Setaria italica Si030998m.g I 0.732
Traes_5BL_D16B19610 Triticum aestivum Traes_5BL_D16B19610 I 0.732
Pavir.J03891 Panicum virgatum Pavir.J03891 I 0.732
Pavir.Ba01280 Panicum virgatum Pavir.Ba01280 I 0.730
Sb02g030300 Sorghum bicolor Sb02g030300 I 0.718
BRADI3G57360 Brachypodium distachyon BRADI3G57360 I 0.709
BRADI4G35610 Brachypodium distachyon BRADI4G35610 I 0.700
DREB1B Oryza indica BGIOSGA029417 N 0.698
ONIVA09G17880 Oryza nivara ONIVA09G17880 N 0.698
ORGLA09G0133000 Oryza glaberrima ORGLA09G0133000 N 0.698
ORUFI09G18190 Oryza rufipogon ORUFI09G18190 N 0.698
Pavir.Fb02246 Panicum virgatum Pavir.Fb02246 I 0.692
Q8W236_WHEAT Triticum aestivum Q8W236_WHEAT D 0.685
OMERI09G12480 Oryza meridionalis OMERI09G12480 I 0.680
OPUNC09G15280 Oryza punctata OPUNC09G15280 I 0.680