CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G124037
(
Zea mays
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
GRMZM2G124037
T002166_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q8GZQ2_MAIZE
M09720_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1A_02
0.861
0.981
DREB1A
M09710_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1A_01
0.710
0.811
DREB1A
M09711_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$SED_Q2
0.710
0.811
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G124037_P01
AP2
63
116
PVFRGVRRRGAAGRWVCEVRVPGRRGARLWLGTYLAAEAAARAHDAAMLALQGR
Links
Other
AP2
family TFs
Other
Zea mays
TFs
54 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Q8GZQ2_MAIZE
Zea mays
Q8GZQ2_MAIZE
D
0.861
GRMZM2G069082
Zea mays
GRMZM2G069082
I
0.846
GRMZM2G069126
Zea mays
GRMZM2G069126
I
0.794
GRMZM2G069146
Zea mays
GRMZM2G069146
I
0.785
ORGLA08G0220100
Oryza glaberrima
ORGLA08G0220100
I
0.785
Pavir.Ba01281
Panicum virgatum
Pavir.Ba01281
I
0.777
Pavir.J03893
Panicum virgatum
Pavir.J03893
I
0.765
BRADI4G35650
Brachypodium distachyon
BRADI4G35650
I
0.764
Pavir.J03892
Panicum virgatum
Pavir.J03892
I
0.764
GRMZM2G124011
Zea mays
GRMZM2G124011
I
0.761
Sb02g030320
Sorghum bicolor
Sb02g030320
I
0.756
Si031001m.g
Setaria italica
Si031001m.g
I
0.756
Pavir.J27101
Panicum virgatum
Pavir.J27101
I
0.756
LPERR09G12950
Leersia perrieri
LPERR09G12950
I
0.755
OBART09G16830
Oryza barthii
OBART09G16830
I
0.755
Sb02g030330
Sorghum bicolor
Sb02g030330
I
0.750
Sb05g006275
Sorghum bicolor
Sb05g006275
I
0.747
Sb02g030340
Sorghum bicolor
Sb02g030340
I
0.746
BRADI4G35610
Brachypodium distachyon
BRADI4G35610
I
0.739
OPUNC09G15260
Oryza punctata
OPUNC09G15260
I
0.739
Pavir.Fb02246
Panicum virgatum
Pavir.Fb02246
I
0.724
Sb02g030310
Sorghum bicolor
Sb02g030310
I
0.723
F775_27111
Aegilops tauschii
F775_27111
I
0.718
Traes_5BL_D16B19610
Triticum aestivum
Traes_5BL_D16B19610
I
0.718
BRADI3G57360
Brachypodium distachyon
BRADI3G57360
I
0.717
BRADI4G35630
Brachypodium distachyon
BRADI4G35630
I
0.713
Si030998m.g
Setaria italica
Si030998m.g
I
0.711
Pavir.J03891
Panicum virgatum
Pavir.J03891
I
0.711
DREB1A
Oryza indica
BGIOSGA029415
I
0.710
OBART09G16810
Oryza barthii
OBART09G16810
I
0.710
OGLUM09G17430
Oryza glumaepatula
OGLUM09G17430
I
0.710
OMERI09G12490
Oryza meridionalis
OMERI09G12490
I
0.710
ONIVA09G17900
Oryza nivara
ONIVA09G17900
I
0.710
OPUNC09G15290
Oryza punctata
OPUNC09G15290
I
0.710
ORUFI09G18210
Oryza rufipogon
ORUFI09G18210
I
0.710
DREB1A
Oryza sativa
OS09G0522200
D
0.710
Pavir.Ba01280
Panicum virgatum
Pavir.Ba01280
I
0.710
Si030869m.g
Setaria italica
Si030869m.g
I
0.707
OMERI09G12480
Oryza meridionalis
OMERI09G12480
I
0.699
OPUNC09G15280
Oryza punctata
OPUNC09G15280
I
0.699
BRADI1G49560
Brachypodium distachyon
BRADI1G49560
I
0.695
DREB1H
Oryza indica
BGIOSGA029416
I
0.692
OGLUM09G17420
Oryza glumaepatula
OGLUM09G17420
I
0.692
ONIVA09G17890
Oryza nivara
ONIVA09G17890
I
0.692
ORGLA09G0133100
Oryza glaberrima
ORGLA09G0133100
I
0.692
ORUFI09G18200
Oryza rufipogon
ORUFI09G18200
I
0.692
DREB1H
Oryza sativa
OS09G0522100
I
0.692
Sb02g030300
Sorghum bicolor
Sb02g030300
I
0.688
BRADI4G35580
Brachypodium distachyon
BRADI4G35580
I
0.687
BRADI1G49570
Brachypodium distachyon
BRADI1G49570
I
0.685
BRADI2G60340
Brachypodium distachyon
BRADI2G60340
I
0.685
MLOC_74460
Hordeum vulgare
MLOC_74460
I
0.685
Traes_5BL_60510E4A7
Triticum aestivum
Traes_5BL_60510E4A7
I
0.685
BRADI4G35620
Brachypodium distachyon
BRADI4G35620
I
0.682