Bra013584 (Brassica rapa)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 Bra013584 T352273_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY31
M07408_2.00 		Arabidopsis thaliana
NNNNHNNNNNDRGTCAACG
CGTTGACYHNNNNNDNNNN		 Dap-seq
OMalley et al.(2016)
WRKY31_col_a 		0.909 0.983
WRKY31
M07409_2.00 		Arabidopsis thaliana
NHWRGTCAACKNH
DNMGTTGACYWDN		 Dap-seq
OMalley et al.(2016)
WRKY31_colamp_a 		0.909 0.983
WRKY6
M07377_2.00 		Arabidopsis thaliana
DNNNHNDHNHNRGTCAACG
CGTTGACYNDNDHNDNNNH		 Dap-seq
OMalley et al.(2016)
WRKY6_col_a 		0.896 0.966
WRKY6
M07378_2.00 		Arabidopsis thaliana
NNHNWRGTCAACKNH
DNMGTTGACYWNDNN		 Dap-seq
OMalley et al.(2016)
WRKY6_colamp_a 		0.896 0.966
WRKY42
M07404_2.00 		Arabidopsis thaliana
NDWRGTCAACDNNNNDNNHNN
NNDNNHNNNNHGTTGACYWHN		 Dap-seq
OMalley et al.(2016)
WRKY42_col_a 		0.892 0.949
WRKY42
M07405_2.00 		Arabidopsis thaliana
HNDNNNWRGTCAACKNHNDD
HHNDNMGTTGACYWNNNHND		 Dap-seq
OMalley et al.(2016)
WRKY42_colamp_a 		0.892 0.949
WRKY47
M00732_2.00 		Arabidopsis thaliana
NNRGTCAACKN
NMGTTGACYNN		 PBM
Chang et al.(2013)
pTH7913 		0.887 0.915
WRKY47
M07402_2.00 		Arabidopsis thaliana
WRGTCAAMGNHVDK
MHBDNCKTTGACYW		 Dap-seq
OMalley et al.(2016)
WRKY47_col_a 		0.887 0.915
WRKY47
M07403_2.00 		Arabidopsis thaliana
NNNHWRGTCAACKNHNNNN
NNNNDNMGTTGACYWDNNN		 Dap-seq
OMalley et al.(2016)
WRKY47_colamp_a 		0.887 0.915
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra013584.1-P WRKY 298 356

Links

Other WRKY family TFs
Other Brassica rapa TFs

654 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA004778 Oryza indica BGIOSGA004778 N
BRADI2G54670 Brachypodium distachyon BRADI2G54670 N
F775_11164 Aegilops tauschii F775_11164 N
GRMZM2G157679 Zea mays GRMZM2G157679 N
LPERR01G31690 Leersia perrieri LPERR01G31690 N
MLOC_69561 Hordeum vulgare MLOC_69561 N
OB01G45620 Oryza brachyantha OB01G45620 N
OBART01G36810 Oryza barthii OBART01G36810 N
OGLUM01G40820 Oryza glumaepatula OGLUM01G40820 N
OLONG_023424 Oryza longistaminata OLONG_023424 N
OMERI01G33930 Oryza meridionalis OMERI01G33930 N
ONIVA10G04710 Oryza nivara ONIVA10G04710 N
OPUNC01G35740 Oryza punctata OPUNC01G35740 N
ORGLA01G0306900 Oryza glaberrima ORGLA01G0306900 N
ORUFI01G40180 Oryza rufipogon ORUFI01G40180 N
OS01G0842200 Oryza sativa OS01G0842200 N
Pavir.Eb03680 Panicum virgatum Pavir.Eb03680 N
Sb03g039510 Sorghum bicolor Sb03g039510 N
Si000234m.g Setaria italica Si000234m.g N
TRAES3BF090100150CFD_g Triticum aestivum TRAES3BF090100150CFD_g N
TRAES3BF108400020CFD_g Triticum aestivum TRAES3BF108400020CFD_g N
Traes_3AL_60B6CD0A5 Triticum aestivum Traes_3AL_60B6CD0A5 N
Traes_3B_A25F058E5 Triticum aestivum Traes_3B_A25F058E5 N
Traes_4DS_050789E2A Triticum aestivum Traes_4DS_050789E2A N
TRIUR3_23165 Triticum urartu TRIUR3_23165 N