CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Si000234m.g
(
Setaria italica
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Si000234m.g
T201483_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si000234m
GRAS
534
904
LETLLIHCAQSVATDDRRGATELLKQIRQHASPKGDGDQRLAYCFANGLEARLAGNGSQIYKSVIMTRFPCTDVLKAYQLYLAACPFKKISHFFANQTIMNAVEKAKKVHIVDYGIYYGFQWPCLIQRLSTRPGGPPRLRITGIDTPQPGFRPAERIEETGRYLKDYAQTFNVPFEFKAIASRFEAVQIEDLQIEKDELLIVNCMFKFKTLMDESVVAESPRNMVLNTIRKMNPHLFIHGIINGSYNAPFFVSRFREALFHYSAVFDMLETNIPRDNEQRLLIESALFGREAINVISCEGMERMERPETYKQWQVRNQRAGFKQLPMNQDIMKRAREKVRCYHKDFIIDEDNKWLLQGWKGRILMALSTWK
Links
Other
GRAS
family TFs
Other
Setaria italica
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Ea03354
Panicum virgatum
Pavir.Ea03354
N
0.954
Sb03g039510
Sorghum bicolor
Sb03g039510
N
0.951
Pavir.Eb03680
Panicum virgatum
Pavir.Eb03680
N
0.949
GRMZM2G157679
Zea mays
GRMZM2G157679
N
0.935
OB01G45620
Oryza brachyantha
OB01G45620
N
0.902
OPUNC01G35740
Oryza punctata
OPUNC01G35740
N
0.902
BRADI2G54670
Brachypodium distachyon
BRADI2G54670
N
0.897
LPERR01G31690
Leersia perrieri
LPERR01G31690
N
0.897
OGLUM01G40820
Oryza glumaepatula
OGLUM01G40820
N
0.897
OMERI01G33930
Oryza meridionalis
OMERI01G33930
N
0.897
BGIOSGA004778
Oryza indica
BGIOSGA004778
N
0.894
OBART01G36810
Oryza barthii
OBART01G36810
N
0.894
OLONG_023424
Oryza longistaminata
OLONG_023424
N
0.894
ONIVA10G04710
Oryza nivara
ONIVA10G04710
N
0.894
ORGLA01G0306900
Oryza glaberrima
ORGLA01G0306900
N
0.894
ORUFI01G40180
Oryza rufipogon
ORUFI01G40180
N
0.894
OS01G0842200
Oryza sativa
OS01G0842200
N
0.894
MLOC_69561
Hordeum vulgare
MLOC_69561
N
0.862
F775_11164
Aegilops tauschii
F775_11164
N
0.854
Traes_3AL_60B6CD0A5
Triticum aestivum
Traes_3AL_60B6CD0A5
N
0.854
TRIUR3_23165
Triticum urartu
TRIUR3_23165
N
0.854
Traes_3B_A25F058E5
Triticum aestivum
Traes_3B_A25F058E5
N
0.851
TRAES3BF090100150CFD_g
Triticum aestivum
TRAES3BF090100150CFD_g
N
0.851
TRAES3BF108400020CFD_g
Triticum aestivum
TRAES3BF108400020CFD_g
N
0.851
Traes_4DS_050789E2A
Triticum aestivum
Traes_4DS_050789E2A
N
0.725