CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.scaffold_195000041
(
Physcomitrella patens
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03106 (WRKY)
IPR003657
fgenesh1_pg.scaffold_195000041
T355657_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.scaffold_195000041
WRKY
378
436
DDGHRGWKKYGNKSIQNSNHCRGYYKCSVKECRAKKMVQPTDTDPTVFEVTYVEKHTCS
Links
Other
WRKY
family TFs
Other
Physcomitrella patens
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA011055
Oryza indica
BGIOSGA011055
N
F775_05339
Aegilops tauschii
F775_05339
N
MLOC_55252
Hordeum vulgare
MLOC_55252
N
OB03G21750
Oryza brachyantha
OB03G21750
N
OBART03G11590
Oryza barthii
OBART03G11590
N
OGLUM03G11560
Oryza glumaepatula
OGLUM03G11560
N
OMERI03G10870
Oryza meridionalis
OMERI03G10870
N
ONIVA03G12790
Oryza nivara
ONIVA03G12790
N
OPUNC03G11140
Oryza punctata
OPUNC03G11140
N
ORGLA03G0112000
Oryza glaberrima
ORGLA03G0112000
N
ORUFI03G11940
Oryza rufipogon
ORUFI03G11940
N
OS03G0264600
Oryza sativa
OS03G0264600
N
Traes_4BL_3B919C814
Triticum aestivum
Traes_4BL_3B919C814
N
Traes_4DL_AA51A43E7
Triticum aestivum
Traes_4DL_AA51A43E7
N