CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10007691m.g
(
Eutrema salsugineum
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03106 (WRKY)
IPR003657
Thhalv10007691m.g
T357012_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WRKY14
M00731_2.00
Arabidopsis thaliana
NRGTCAAMNN
NNKTTGACYN
PBM
Chang et al.(2013)
pTH7570
0.900
1.000
WRKY14
M07375_2.00
Arabidopsis thaliana
NAAAGTCAACGNN
NNCGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY14_col_a
0.900
1.000
WRKY14
M07376_2.00
Arabidopsis thaliana
NAAAGTCAACGNH
DNCGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY14_colamp_a
0.900
1.000
WRKY65
M07372_2.00
Arabidopsis thaliana
NWWAGTCAACG
CGTTGACTWWN
Dap-seq
OMalley et al.(2016)
WRKY65_col_a
0.891
0.864
WRKY65
M07373_2.00
Arabidopsis thaliana
NAAAGTCAACGN
NCGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY65_colamp_a
0.891
0.864
WRKY27
M02566_2.00
Arabidopsis thaliana
NNGTCHDNN
NNHDGACNN
PBM
Weirauch et al.(2014)
pTH8188
0.891
0.814
WRKY27
M07430_2.00
Arabidopsis thaliana
MAAAGTCAACKNH
DNMGTTGACTTTK
Dap-seq
OMalley et al.(2016)
WRKY27_col_a
0.891
0.814
WRKY27
M07431_2.00
Arabidopsis thaliana
HAAAGTCAACKNH
DNMGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY27_colamp_a
0.891
0.814
WRKY22
M02557_2.00
Arabidopsis thaliana
NNNKTMHDNN
NNHDKAMNNN
PBM
Weirauch et al.(2014)
pTH7320
0.884
0.814
WRKY22
M07400_2.00
Arabidopsis thaliana
AAAAGTCAACKNH
DNMGTTGACTTTT
Dap-seq
OMalley et al.(2016)
WRKY22_colamp_a
0.884
0.814
WRKY22
M07401_2.00
Arabidopsis thaliana
NAAAGTCAACKNH
DNMGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY22_col
0.884
0.814
WRKY29
M02558_2.00
Arabidopsis thaliana
NNNGTCHDNN
NNHDGACNNN
PBM
Weirauch et al.(2014)
pTH9604
0.868
0.763
WRKY29
M07410_2.00
Arabidopsis thaliana
HAAAGTCAACK
MGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY29_col_a
0.868
0.763
WRKY29
M07411_2.00
Arabidopsis thaliana
HWWAGTCAAMDNN
NNHKTTGACTWWD
Dap-seq
OMalley et al.(2016)
WRKY29_colamp_a
0.868
0.763
WRKY21
M02553_2.00
Arabidopsis thaliana
NNRGTCAAMN
NKTTGACYNN
PBM
Weirauch et al.(2014)
pTH7422
0.866
0.695
WRKY21
M07389_2.00
Arabidopsis thaliana
HAAAGTCAACNNH
DNNGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY21_colamp_a
0.866
0.695
WRKY21
M07390_2.00
Arabidopsis thaliana
HAAAGTCAACK
MGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY21_col
0.866
0.695
Q40828_PETCR
M11467_2.00
Petroselinum crispum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRKY_Q2
0.857
0.678
WRKY11
M02559_2.00
Arabidopsis thaliana
NDGTCAAHNN
NNDTTGACHN
PBM
Weirauch et al.(2014)
pTH8091
0.852
0.644
WRKY11
M07415_2.00
Arabidopsis thaliana
NHAAAGTCAACBNH
DNVGTTGACTTTDN
Dap-seq
OMalley et al.(2016)
WRKY11_col_a
0.852
0.644
WRKY11
M11464_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRKY11_Q2
0.852
0.644
WRKY15
M02549_2.00
Arabidopsis thaliana
NRGTCAAMNN
NNKTTGACYN
PBM
Weirauch et al.(2014)
pTH7602
0.851
0.644
WRKY15
M07383_2.00
Arabidopsis thaliana
AAAAGTCAACKN
NMGTTGACTTTT
Dap-seq
OMalley et al.(2016)
WRKY15_colamp_a
0.851
0.644
WRKY15
M07384_2.00
Arabidopsis thaliana
NWAAGTCAACB
VGTTGACTTWN
Dap-seq
OMalley et al.(2016)
WRKY15_col_b
0.851
0.644
WRKY17
M02550_2.00
Arabidopsis thaliana
NNDGTCAAHN
NDTTGACHNN
PBM
Weirauch et al.(2014)
pTH8088
0.850
0.627
WRKY17
M07385_2.00
Arabidopsis thaliana
NHAAAGTCAACRNN
NNYGTTGACTTTDN
Dap-seq
OMalley et al.(2016)
WRKY17_col_a
0.850
0.627
WRKY17
M07386_2.00
Arabidopsis thaliana
NMAAAGTCAACGN
NCGTTGACTTTKN
Dap-seq
OMalley et al.(2016)
WRKY17_colamp_a
0.850
0.627
WRKY7
M07412_2.00
Arabidopsis thaliana
NNDDDNNNNMAAAGTCAACGV
BCGTTGACTTTKNNNNHHHNN
Dap-seq
OMalley et al.(2016)
WRKY7_colamp_a
0.848
0.661
WRKY7
M07413_2.00
Arabidopsis thaliana
NAAAAGTCAACKNN
NNMGTTGACTTTTN
Dap-seq
OMalley et al.(2016)
WRKY7_col
0.848
0.661
WRKY48
M02565_2.00
Arabidopsis thaliana
NNVGTCADNN
NNHTGACBNN
PBM
Weirauch et al.(2014)
pTH7552
0.832
0.525
WRKY8
M02564_2.00
Arabidopsis thaliana
NRGTCAAHN
NDTTGACYN
PBM
Weirauch et al.(2014)
pTH7554
0.829
0.542
WRKY8
M07428_2.00
Arabidopsis thaliana
NAAAAGTCAACRNHW
WDNYGTTGACTTTTN
Dap-seq
OMalley et al.(2016)
WRKY8_colamp_a
0.829
0.542
WRKY8
M07429_2.00
Arabidopsis thaliana
NNVAAAGTCAACRNH
DNYGTTGACTTTBNN
Dap-seq
OMalley et al.(2016)
WRKY8_col
0.829
0.542
WRKY28
M07406_2.00
Arabidopsis thaliana
HAAAGTCAAMNNH
DNNKTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY28_col_a
0.829
0.525
WRKY28
M07407_2.00
Arabidopsis thaliana
VAAAGTCAAMG
CKTTGACTTTB
Dap-seq
OMalley et al.(2016)
WRKY28_colamp_a
0.829
0.525
WRKY71
M07374_2.00
Arabidopsis thaliana
HAAAGTCAAMN
NKTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY71_col_a
0.829
0.525
WRKY57
M02547_2.00
Arabidopsis thaliana
NNRGTCAAHN
NDTTGACYNN
PBM
Weirauch et al.(2014)
pTH7917
0.826
0.525
ZAP1
M00982_2.00
Arabidopsis thaliana
NRGTCAAN
NTTGACYN
PBM
Lindemose et al.(2014)
WRKY1
0.825
0.559
WRKY23
M02556_2.00
Arabidopsis thaliana
RGTCAACG
CGTTGACY
PBM
Weirauch et al.(2014)
pTH7387
0.825
0.525
WRKY23
M01089_2.00
Arabidopsis thaliana
NRGTCAAM
KTTGACYN
PBM
Sullivan et al.(2014)
pTH7671
0.825
0.525
WRKY59
M07382_2.00
Arabidopsis thaliana
NDWWAGTCAAMN
NKTTGACTWWHN
Dap-seq
OMalley et al.(2016)
WRKY59_col_a
0.822
0.508
fgenesh1_pg.C_Chr_11.0001000193
M02570_2.00
Ostreococcus tauri
NRGTCARNN
NNYTGACYN
PBM
Weirauch et al.(2014)
pTH9432
0.810
0.492
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10007691m
WRKY
211
269
SDLWAWRKYGQKPIKGSPFPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHP
Links
Other
WRKY
family TFs
Other
Eutrema salsugineum
TFs
1605 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL004707
Aedes aegypti
AAEL004707
I
AARA001840
Anopheles arabiensis
AARA001840
I
AATE006277
Anopheles atroparvus
AATE006277
I
ACHR001525
Anopheles christyi
ACHR001525
I
ACOC_0000843601
Angiostrongylus costaricensis
ACOC_0000843601
I
ACOM034050
Anopheles coluzzii
ACOM034050
I
ACUA024331
Anopheles culicifacies
ACUA024331
I
ADIR002846
Anopheles dirus
ADIR002846
I
AEPI001110
Anopheles epiroticus
AEPI001110
I
AFAF018650
Anopheles farauti
AFAF018650
I
Afo_R002655
Aptenodytes forsteri
Afo_R002655
I
AFUN007808
Anopheles funestus
AFUN007808
I
AGAP001389
Anopheles gambiae
AGAP001389
I
Alligator_sinensis_CCG013675.1
Alligator sinensis
Alligator_sinensis_CCG013675.1
I
AMAM015319
Anopheles maculatus
AMAM015319
I
AMEC012825
Anopheles melas
AMEC012825
I
AMEM017315
Anopheles merus
AMEM017315
I
AMIN000568
Anopheles minimus
AMIN000568
I
AQUA006568
Anopheles quadriannulatus
AQUA006568
I
ASIM_0001155801
Anisakis simplex
ASIM_0001155801
I
ASIS014034
Anopheles sinensis
ASIS014034
I
ASTEI07538
Anopheles stephensi
ASTEI07538
I
ASU_02199
Ascaris suum
ASU_02199
I
augustus_masked-nMf.1.1.scaf09384-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf09384-processed-gene-0.0
I
BGIBMGA010054
Bombyx mori
BGIBMGA010054
I
Bm5107
Brugia malayi
Bm5107
I
BTMF_0001400701
Brugia timori
BTMF_0001400701
I
BXY_0632900
Bursaphelenchus xylophilus
BXY_0632900
I
CapteG110019
Capitella teleta
CapteG110019
I
CapteG129537
Capitella teleta
CapteG129537
I
CBG08137
Caenorhabditis briggsae
CBG08137
I
CBN29205
Caenorhabditis brenneri
CBN29205
I
CGI_10025054
Crassostrea gigas
CGI_10025054
I
Cmyd_10016939
Chelonia mydas
Cmyd_10016939
I
CPIJ003318
Culex quinquefasciatus
CPIJ003318
I
CpipJ_CPIJ003318
Culex pipiens
CpipJ_CPIJ003318
I
CRE17126
Caenorhabditis remanei
CRE17126
I
DAPPUDRAFT_229438
Daphnia pulex
DAPPUDRAFT_229438
I
DME_0000899101
Dracunculus medinensis
DME_0000899101
I
HHEX
Anolis carolinensis
ENSACAG00000006660
I
ENSAMEG00000014091
Ailuropoda melanoleuca
ENSAMEG00000014091
I
ENSAMXG00000011188
Astyanax mexicanus
ENSAMXG00000011188
I
ENSAPLG00000004046
Anas platyrhynchos
ENSAPLG00000004046
I
HHEX
Bos taurus
ENSBTAG00000014217
I
ENSBTAP00000018899-D1
Bos grunniens
ENSBTAP00000018899-D1
I
HHEX
Canis familiaris
ENSCAFG00000007502
I
HHEX
Choloepus hoffmanni
ENSCHOG00000005837
I
hex
Ciona intestinalis
ENSCING00000001270
I
HHEX
Callithrix jacchus
ENSCJAG00000008627
I
ENSCPOG00000021993
Cavia porcellus
ENSCPOG00000021993
I
ENSCSAG00000006543
Chlorocebus sabaeus
ENSCSAG00000006543
I
ENSCSAVG00000001801
Ciona savignyi
ENSCSAVG00000001801
I
HHEX
Dasypus novemcinctus
ENSDNOG00000041940
I
HHEX
Equus caballus
ENSECAG00000005199
I
ENSFALG00000007921
Ficedula albicollis
ENSFALG00000007921
I
HHEX
Felis catus
ENSFCAG00000023875
I
HHEX
Homo sapiens
ENSG00000152804
I
HHEX
Gasterosteus aculeatus
ENSGACG00000015385
I
ENSGALG00000029169
Gallus gallus
ENSGALG00000029169
I
ENSGGOG00000026464
Gorilla gorilla
ENSGGOG00000026464
I
ENSGGOG00000027676
Gorilla gorilla
ENSGGOG00000027676
I
ENSGMOG00000011697
Gadus morhua
ENSGMOG00000011697
I
ENSLACG00000009588
Latimeria chalumnae
ENSLACG00000009588
I
ENSLACG00000014170
Latimeria chalumnae
ENSLACG00000014170
I
ENSLAFG00000005359
Loxodonta africana
ENSLAFG00000005359
I
ENSLOCG00000007051
Lepisosteus oculatus
ENSLOCG00000007051
I
ENSMEUG00000004291
Macropus eugenii
ENSMEUG00000004291
I
ENSMGAG00000009052
Meleagris gallopavo
ENSMGAG00000009052
I
ENSMLUG00000013333
Myotis lucifugus
ENSMLUG00000013333
I
ENSMLUG00000024763
Myotis lucifugus
ENSMLUG00000024763
I
HHEX
Macaca mulatta
ENSMMUG00000011789
I
HHEX
Monodelphis domestica
ENSMODG00000006444
I
ENSMPUG00000017219
Mustela putorius furo
ENSMPUG00000017219
I
Hhex
Mus musculus
ENSMUSG00000024986
I
HHEX
Oryctolagus cuniculus
ENSOCUG00000016719
I
HHEX
Otolemur garnettii
ENSOGAG00000015201
I
ENSONIG00000007247
Oreochromis niloticus
ENSONIG00000007247
I
HHEX
Ochotona princeps
ENSOPRG00000003896
I
ENSP00000282728
Macaca fascicularis
ENSP00000282728
I
ENSPANG00000021555
Papio anubis
ENSPANG00000021555
I
ENSPFOG00000009869
Poecilia formosa
ENSPFOG00000009869
I
ENSPMAG00000009445
Petromyzon marinus
ENSPMAG00000009445
I
ENSPPYG00000002486
Pongo abelii
ENSPPYG00000002486
I
ENSPSIG00000015884
Pelodiscus sinensis
ENSPSIG00000015884
I
HHEX
Pan troglodytes
ENSPTRG00000002760
I
HHEX
Pteropus vampyrus
ENSPVAG00000007094
I
Hhex
Rattus norvegicus
ENSRNOG00000016595
I
ENSSHAG00000018185
Sarcophilus harrisii
ENSSHAG00000018185
I
ENSSSCG00000010472
Sus scrofa
ENSSSCG00000010472
I
ENSSTOG00000006255
Ictidomys tridecemlineatus
ENSSTOG00000006255
I
ENSTBEG00000001339
Tupaia belangeri
ENSTBEG00000001339
I
ENSTGUG00000008924
Taeniopygia guttata
ENSTGUG00000008924
I
ENSTGUG00000013882
Taeniopygia guttata
ENSTGUG00000013882
I
HHEX
Tetraodon nigroviridis
ENSTNIG00000005879
I
HHEX
Takifugu rubripes
ENSTRUG00000004234
I
HHEX
Tursiops truncatus
ENSTTRG00000012365
I
HHEX
Vicugna pacos
ENSVPAG00000009916
I
e_gw.54.243.1
Branchiostoma floridae
e_gw.54.243.1
I
e_gw.56.215.1
Branchiostoma floridae
e_gw.56.215.1
I
HHEX
Drosophila melanogaster
FBgn0038852
D
GA20065
Drosophila pseudoobscura
FBgn0080061
I
GF18520
Drosophila ananassae
FBgn0095538
I
GG14915
Drosophila erecta
FBgn0107169
I
GH19308
Drosophila grimshawi
FBgn0126773
I
GI23524
Drosophila mojavensis
FBgn0146250
I
GL12681
Drosophila persimilis
FBgn0150287
I
GD20010
Drosophila simulans
FBgn0191493
I
GJ10276
Drosophila virilis
FBgn0197562
I
GK13080
Drosophila willistoni
FBgn0215089
I
GPLIN_000004000
Globodera pallida
GPLIN_000004000
I
HCOI01904700
Haemonchus contortus
HCOI01904700
I
HelroG80789
Helobdella robusta
HelroG80789
I
HMEL004646
Heliconius melpomene
HMEL004646
I
HPLM_0000551901
Haemonchus placei
HPLM_0000551901
I
KGM_13906
Danaus plexippus
KGM_13906
I
L596_g25649
Steinernema carpocapsae
L596_g25649
I
L798_02156
Zootermopsis nevadensis
L798_02156
I
L889_g29725
Steinernema feltiae
L889_g29725
I
L892_g7017
Steinernema scapterisci
L892_g7017
I
L898_g1404
Steinernema monticolum
L898_g1404
I
LCUP007736
Lucilia cuprina
LCUP007736
I
LLOJ007496
Lutzomyia longipalpis
LLOJ007496
I
LOAG_11830
Loa loa
LOAG_11830
I
LotgiG128951
Lottia gigantea
LotgiG128951
I
MESCA008304
Megaselia scalaris
MESCA008304
I
MhA1_Contig193.frz3.gene1
Meloidogyne hapla
MhA1_Contig193.frz3.gene1
I
Myotis_brandtii_KIF11_10018005
Myotis brandtii
Myotis_brandtii_KIF11_10018005
I
nAv.1.0.1.g00022
Acanthocheilonema viteae
nAv.1.0.1.g00022
I
NBR_0000887601
Nippostrongylus brasiliensis
NBR_0000887601
I
nDi.2.2.2.g05290
Dirofilaria immitis
nDi.2.2.2.g05290
I
NEMVEDRAFT_v1g39891
Nematostella vectensis
NEMVEDRAFT_v1g39891
I
nLs.2.1.2.g00270
Litomosoides sigmodontis
nLs.2.1.2.g00270
I
nOo.2.0.1.g09114
Onchocerca ochengi
nOo.2.0.1.g09114
I
nRc.2.0.1.g06585
Romanomermis culicivorax
nRc.2.0.1.g06585
I
OFLC_0000354301
Onchocerca flexuosa
OFLC_0000354301
I
Ogr00908
Ophisaurus gracilis
Ogr00908
I
PTRK_0000720600
Parastrongyloides trichosuri
PTRK_0000720600
I
Pvit_14369
Pogona vitticeps
Pvit_14369
I
RSKR_0000094800
Rhabditophanes kr3021
RSKR_0000094800
I
Sakowv30040087m.g
Saccoglossus kowalevskii
Sakowv30040087m.g
I
scaffold24-EXSNAP2012.65
Pristionchus exspectatus
scaffold24-EXSNAP2012.65
I
SMAR000779
Strigamia maritima
SMAR000779
I
SPAL_0000841600
Strongyloides papillosus
SPAL_0000841600
I
SPU_027215
Strongylocentrotus purpuratus
SPU_027215
I
SSTP_0000145800
Strongyloides stercoralis
SSTP_0000145800
I
SVE_1799000
Strongyloides venezuelensis
SVE_1799000
I
TC004555
Tribolium castaneum
TC004555
I
TCLT_0000379201
Thelazia callipaeda
TCLT_0000379201
I
TELCIR_00798
Teladorsagia circumcincta
TELCIR_00798
I
tetur29g00560
Tetranychus urticae
tetur29g00560
I
TriadG9560
Trichoplax adhaerens
TriadG9560
I
pha-2
Caenorhabditis elegans
WBGene00004011
D
WBGene00240685
Onchocerca volvulus
WBGene00240685
I
WUBG_10995
Wuchereria bancrofti
WUBG_10995
I
hhex
Xenopus tropicalis
XB-GENE-487159
I
hhex.L
Xenopus laevis
XB-GENE-865680
I