VDBG_01336 (Verticillium albo atrum)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 VDBG_01336 T357946_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU08527
M02627_2.00 		Neurospora crassa
NKYCGGCGNNN
NNNCGCCGRMN		 PBM
Weirauch et al.(2014)
pTH8938 		0.549 0.744
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VDBG_01336T0 Zinc cluster 13 53

Links

Other Zinc cluster family TFs
Other Verticillium albo atrum TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
FFUJ_12640 Fusarium fujikuroi FFUJ_12640 N
fgenesh1_pg.sca_43_chr10_1_0000008 Nectria haematococca fgenesh1_pg.sca_43_chr10_1_0000008 N
FOXG_14518 Fusarium oxysporum FOXG_14518 N
FVEG_13362 Fusarium verticillioides FVEG_13362 N
NechaG85294 Fusarium solani NechaG85294 N
VDBG_04603 Verticillium albo atrum VDBG_04603 N
VDBG_04603 Verticillium alfalfae VDBG_04603 N