CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NCU08527
(
Neurospora crassa
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
NCU08527
T390648_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU08527
M02627_2.00
Neurospora crassa
NKYCGGCGNNN
NNNCGCCGRMN
PBM
Weirauch et al.(2014)
pTH8938
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.537
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02627_2.00
Zinc cluster
11
62
LACDRCHSQKLRCPRQDNYRTTKDGTSEQPAPCVRCERAKVACVFSPRQRRT
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCU08527
Zinc cluster
11
62
LACDRCHSQKLRCPRQDNYRTTKDGTSEQPAPCVRCERAKVACVFSPRQRRT
Links
Other
Zinc cluster
family TFs
Other
Neurospora crassa
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgenesh3_pm.C_180042
Neurospora discreta
estExt_fgenesh3_pm.C_180042
I
0.675
SMAC_09321
Sordaria macrospora
SMAC_09321
I
0.645
MBM_05148
Marssonina brunnea
MBM_05148
I
0.555
VDBG_01336
Verticillium albo atrum
VDBG_01336
I
0.549
VDBG_01336
Verticillium alfalfae
VDBG_01336
I
0.549
VDAG_07921
Verticillium dahliae
VDAG_07921
I
0.547
TSTA_038010
Talaromyces stipitatus
TSTA_038010
I
0.540