CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_01807
(
Verticillium albo atrum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
VDBG_01807
T357952_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_01807T0
Zinc cluster
21
48
LVQCDEKRPCTACVRHGTECSLVQGPPS
Links
Other
Zinc cluster
family TFs
Other
Verticillium albo atrum
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CSUB01_06102
Colletotrichum sublineola
CSUB01_06102
N
0.548
estExt_fgenesh1_pg.C_sca_41_chr12_2_00090
Nectria haematococca
estExt_fgenesh1_pg.C_sca_41_chr12_2_00090
N
0.560
e_gw1.100.23.1
Nectria haematococca
e_gw1.100.23.1
N
0.547
fgenesh1_pg.C_scaffold_9000410
Cryphonectria parasitica
fgenesh1_pg.C_scaffold_9000410
N
0.568
GLRG_05364
Colletotrichum graminicola
GLRG_05364
N
0.538
HMPREF1120_04133
Exophiala dermatitidis
HMPREF1120_04133
N
0.549
HMPREF1624_08182
Sporothrix schenckii
HMPREF1624_08182
N
0.547
LEMA_P104170.1
Leptosphaeria maculans
LEMA_P104170.1
N
0.540
MPH_11049
Macrophomina phaseolina
MPH_11049
N
0.552
NechaG102087
Fusarium solani
NechaG102087
N
0.560
NechaG56106
Fusarium solani
NechaG56106
N
0.547
PEX1_051210
Penicillium expansum
PEX1_051210
N
0.556
PEX1_085400
Penicillium expansum
PEX1_085400
N
0.544
PV05_11779
Exophiala xenobiotica
PV05_11779
N
0.552
PV06_08153
Exophiala oligosperma
PV06_08153
N
0.538
SBOR_5781
Sclerotinia borealis
SBOR_5781
N
0.550
sr16602
Sporisorium reilianum
sr16602
N
0.540
U727_00433130301
Penicillium solitum
U727_00433130301
N
0.552
VDBG_01807
Verticillium alfalfae
VDBG_01807
N
0.683