CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pg.C_sca_41_chr12_2_00090
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_fgenesh1_pg.C_sca_41_chr12_2_00090
T389654_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pg.C_sca_41_chr12_2_00090
Zinc cluster
15
41
VCDETRPKCLSCVQRGVECGGYERRIA
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NechaG102087
Fusarium solani
NechaG102087
N
0.683
ACLA_088930
Aspergillus clavatus
CADACLAG00008857
N
0.592
SAPIO_CDS3191
Scedosporium apiospermum
SAPIO_CDS3191
N
0.578
e_gw1.34.5.1
Cochliobolus heterostrophus C5
e_gw1.34.5.1
N
0.576
MPH_11049
Macrophomina phaseolina
MPH_11049
N
0.575
U727_00433130301
Penicillium solitum
U727_00433130301
N
0.573
CHGG_00926
Chaetomium globosum
CHGG_00926
N
0.570
Z518_08215
Rhinocladiella mackenziei
Z518_08215
N
0.566
VDBG_01807
Verticillium albo atrum
VDBG_01807
N
0.560
VDBG_01807
Verticillium alfalfae
VDBG_01807
N
0.560
PV06_08153
Exophiala oligosperma
PV06_08153
N
0.553
PEX1_085400
Penicillium expansum
PEX1_085400
N
0.551
MCYG_00717
Microsporum canis
MCYG_00717
N
0.549
BDDG_07110
Blastomyces dermatitidis
BDDG_07110
N
0.548
S40285_09207
Stachybotrys chlorohalonata
S40285_09207
N
0.546
TSTA_058560
Talaromyces stipitatus
TSTA_058560
N
0.546
S40285_04043
Stachybotrys chlorohalonata
S40285_04043
N
0.545
SBOR_2893
Sclerotinia borealis
SBOR_2893
N
0.545
VDAG_07640
Verticillium dahliae
VDAG_07640
N
0.541