CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CADANGAG00008625
(
Aspergillus niger
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
CADANGAG00008625
T361591_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_04175
M01361_2.00
Aspergillus nidulans
NNNCGGRNNN
NNNYCCGNNN
PBM
Lambert et al.(2019)
pEX0225
0.611
0.872
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADANGAP00008471
Zinc cluster
18
57
TACVPCRESKIRCDGATPNCHNCEKKGKDCKYQHGDDKRN
Links
Other
Zinc cluster
family TFs
Other
Aspergillus niger
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00029p00112130
Amborella trichopoda
AMTR_s00029p00112130
N
BGIOSGA007247
Oryza indica
BGIOSGA007247
N
GLYMA12G34300
Glycine max
GLYMA12G34300
I
GLYMA13G36260
Glycine max
GLYMA13G36260
I
GLYMA15G06803
Glycine max
GLYMA15G06803
I
GLYMA15G06860
Glycine max
GLYMA15G06860
I
GRMZM2G314882
Zea mays
GRMZM2G314882
N
GRMZM5G856837
Zea mays
GRMZM5G856837
N
GSMUA_Achr8G33180_001
Musa acuminata
GSMUA_Achr8G33180_001
I
LPERR02G01020
Leersia perrieri
LPERR02G01020
N
OBART02G01220
Oryza barthii
OBART02G01220
N
OGLUM02G01100
Oryza glumaepatula
OGLUM02G01100
N
OLONG_000275
Oryza longistaminata
OLONG_000275
N
OMERI02G00630
Oryza meridionalis
OMERI02G00630
N
ONIVA02G01100
Oryza nivara
ONIVA02G01100
N
OPUNC02G00650
Oryza punctata
OPUNC02G00650
N
ORUFI02G01220
Oryza rufipogon
ORUFI02G01220
N
OS02G0116600
Oryza sativa
OS02G0116600
N
Pavir.Aa03509
Panicum virgatum
Pavir.Aa03509
N
Pavir.Ab00172
Panicum virgatum
Pavir.Ab00172
N
Pavir.Ab02693
Panicum virgatum
Pavir.Ab02693
N
PDK_20s1322801g004
Phoenix dactylifera
PDK_20s1322801g004
N
Sb04g001200
Sorghum bicolor
Sb04g001200
N
Si018232m.g
Setaria italica
Si018232m.g
N