AMTR_s00029p00112130 (Amborella trichopoda)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 AMTR_s00029p00112130 T030497_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ERN09491 bHLH 67 116

Links

Other bHLH family TFs
Other Amborella trichopoda TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SELMODRAFT_165311 Selaginella moellendorffii SELMODRAFT_165311 I 0.890
SELMODRAFT_165556 Selaginella moellendorffii SELMODRAFT_165556 I 0.890
e_gw1.229.33.1 Physcomitrella patens e_gw1.229.33.1 I 0.890
estExt_gwp_gw1.C_2460032 Physcomitrella patens estExt_gwp_gw1.C_2460032 I 0.890
fgenesh1_pg.scaffold_13000185 Physcomitrella patens fgenesh1_pg.scaffold_13000185 I 0.890
PDK_20s1322801g004 Phoenix dactylifera PDK_20s1322801g004 N 0.875
Eucgr.F03420 Eucalyptus grandis Eucgr.F03420 I 0.873
GLYMA12G34300 Glycine max GLYMA12G34300 I 0.872
GLYMA13G36260 Glycine max GLYMA13G36260 I 0.872
Ciclev10016381m.g Citrus clementina Ciclev10016381m.g N 0.870
orange1.1g026646m.g Citrus sinensis orange1.1g026646m.g N 0.870
AMTR_s00098p00170370 Amborella trichopoda AMTR_s00098p00170370 N 0.866
PRUPE_ppa010730mg Prunus persica PRUPE_ppa010730mg I 0.864
TCM_030082 Theobroma cacao TCM_030082 I 0.864
VIT_00s0532g00050 Vitis vinifera VIT_00s0532g00050 N 0.864
GLYMA06G41620 Glycine max GLYMA06G41620 I 0.860
MTR_2g082640 Medicago truncatula MTR_2g082640 I 0.860
MTR_4g081370 Medicago truncatula MTR_4g081370 I 0.860
POPTR_0001s44230 Populus trichocarpa POPTR_0001s44230 I 0.860
POPTR_0011s13580 Populus trichocarpa POPTR_0011s13580 I 0.860
PRUPE_ppa009077mg Prunus persica PRUPE_ppa009077mg I 0.860
TCM_031118 Theobroma cacao TCM_031118 I 0.860
Ca_06956 Cicer arietinum Ca_06956 I 0.860
Ca_16355 Cicer arietinum Ca_16355 I 0.860
Cla001735 Citrullus lanatus Cla001735 I 0.860
Pm029465 Prunus mume Pm029465 I 0.860
28166.m001054 Ricinus communis 28166.m001054 I 0.860
cassava24574.valid.m1 Manihot esculenta cassava24574.valid.m1 I 0.860
cassava37031.valid.m1 Manihot esculenta cassava37031.valid.m1 I 0.860
cassava37032.valid.m1 Manihot esculenta cassava37032.valid.m1 I 0.860
Cucsa.267130 Cucumis sativus Cucsa.267130 I 0.860
Cucsa.267170 Cucumis sativus Cucsa.267170 I 0.860
Ciclev10009354m.g Citrus clementina Ciclev10009354m.g I 0.860
evm.TU.supercontig_97.78 Carica papaya evm.TU.supercontig_97.78 I 0.860
gene03303-v1.0-hybrid Fragaria vesca gene03303-v1.0-hybrid I 0.860
gene24654-v1.0-hybrid Fragaria vesca gene24654-v1.0-hybrid I 0.860
Lus10011167.g Linum usitatissimum Lus10011167.g I 0.860
Lus10043076.g Linum usitatissimum Lus10043076.g I 0.860
MDP0000264803 Malus domestica MDP0000264803 I 0.860
orange1.1g026599m.g Citrus sinensis orange1.1g026599m.g I 0.860
SapurV1A.0712s0010 Salix purpurea SapurV1A.0712s0010 I 0.860
PK23013.1 Cannabis sativa PK23013.1 I 0.860
BGIOSGA007247 Oryza indica BGIOSGA007247 N 0.845
LPERR02G01020 Leersia perrieri LPERR02G01020 N 0.845
OBART02G01220 Oryza barthii OBART02G01220 N 0.845
OGLUM02G01100 Oryza glumaepatula OGLUM02G01100 N 0.845
OLONG_000275 Oryza longistaminata OLONG_000275 N 0.845
OMERI02G00630 Oryza meridionalis OMERI02G00630 N 0.845
ONIVA02G01100 Oryza nivara ONIVA02G01100 N 0.845
OPUNC02G00650 Oryza punctata OPUNC02G00650 N 0.845
ORGLA02G0011200 Oryza glaberrima ORGLA02G0011200 N 0.845
ORUFI02G01220 Oryza rufipogon ORUFI02G01220 N 0.845
OS02G0116600 Oryza sativa OS02G0116600 N 0.845
Si018232m.g Setaria italica Si018232m.g N 0.845
Pavir.Ab00172 Panicum virgatum Pavir.Ab00172 N 0.845
GSMUA_Achr4G05310_001 Musa acuminata GSMUA_Achr4G05310_001 N 0.843
VIT_12s0059g02650 Vitis vinifera VIT_12s0059g02650 I 0.843
Aquca_005_00425 Aquilegia coerulea Aquca_005_00425 I 0.843
GSMUA_Achr4G05280_001 Musa acuminata GSMUA_Achr4G05280_001 N 0.842
Gorai.009G176000 Gossypium raimondii Gorai.009G176000 N 0.840
estExt_fgenesh1_pg.C_1360017 Physcomitrella patens estExt_fgenesh1_pg.C_1360017 I 0.839
fgenesh1_pg.scaffold_31000088 Physcomitrella patens fgenesh1_pg.scaffold_31000088 I 0.839