CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA06G41620
(
Glycine max
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
GLYMA06G41620
T039561_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ILR3
M01714_2.00
Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH7211
0.886
0.863
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA06G41620.1
bHLH
77
127
SGSKACREKLRRDRLNDKFVELGAILEPGRPAKTDKAAILIDAVRMVTQLR
Links
Other
bHLH
family TFs
Other
Glycine max
TFs
69 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MTR_2g082640
Medicago truncatula
MTR_2g082640
I
0.914
MTR_4g081370
Medicago truncatula
MTR_4g081370
I
0.914
POPTR_0001s44230
Populus trichocarpa
POPTR_0001s44230
I
0.914
POPTR_0011s13580
Populus trichocarpa
POPTR_0011s13580
I
0.914
PRUPE_ppa009077mg
Prunus persica
PRUPE_ppa009077mg
I
0.914
TCM_031118
Theobroma cacao
TCM_031118
I
0.914
Ca_06956
Cicer arietinum
Ca_06956
I
0.914
Ca_16355
Cicer arietinum
Ca_16355
I
0.914
Cla001735
Citrullus lanatus
Cla001735
I
0.914
Pm029465
Prunus mume
Pm029465
I
0.914
28166.m001054
Ricinus communis
28166.m001054
I
0.914
cassava24574.valid.m1
Manihot esculenta
cassava24574.valid.m1
I
0.914
cassava37031.valid.m1
Manihot esculenta
cassava37031.valid.m1
I
0.914
cassava37032.valid.m1
Manihot esculenta
cassava37032.valid.m1
I
0.914
Cucsa.267130
Cucumis sativus
Cucsa.267130
I
0.914
Cucsa.267170
Cucumis sativus
Cucsa.267170
I
0.914
Ciclev10009354m.g
Citrus clementina
Ciclev10009354m.g
I
0.914
Eucgr.F03420
Eucalyptus grandis
Eucgr.F03420
I
0.914
evm.TU.supercontig_97.78
Carica papaya
evm.TU.supercontig_97.78
I
0.914
gene03303-v1.0-hybrid
Fragaria vesca
gene03303-v1.0-hybrid
I
0.914
gene24654-v1.0-hybrid
Fragaria vesca
gene24654-v1.0-hybrid
I
0.914
Lus10011167.g
Linum usitatissimum
Lus10011167.g
I
0.914
Lus10043076.g
Linum usitatissimum
Lus10043076.g
I
0.914
MDP0000264803
Malus domestica
MDP0000264803
I
0.914
orange1.1g026599m.g
Citrus sinensis
orange1.1g026599m.g
I
0.914
SapurV1A.0712s0010
Salix purpurea
SapurV1A.0712s0010
I
0.914
PK23013.1
Cannabis sativa
PK23013.1
I
0.914
PRUPE_ppa010730mg
Prunus persica
PRUPE_ppa010730mg
I
0.911
GLYMA12G34300
Glycine max
GLYMA12G34300
I
0.903
VIT_12s0059g02650
Vitis vinifera
VIT_12s0059g02650
I
0.891
ILR3
Arabidopsis thaliana
AT5G54680
D
0.886
Bra002964
Brassica rapa
Bra002964
I
0.886
Bra022738
Brassica rapa
Bra022738
I
0.886
ILR3
Arabidopsis lyrata
fgenesh2_kg.8__1365__AT5G54680.1
I
0.886
Bostr.26833s0797
Boechera stricta
Bostr.26833s0797
I
0.886
Cagra.1629s0040
Capsella grandiflora
Cagra.1629s0040
I
0.886
Carubv10026758m.g
Capsella rubella
Carubv10026758m.g
I
0.886
Thhalv10014564m.g
Eutrema salsugineum
Thhalv10014564m.g
I
0.886
e_gw1.229.33.1
Physcomitrella patens
e_gw1.229.33.1
I
0.885
estExt_gwp_gw1.C_2460032
Physcomitrella patens
estExt_gwp_gw1.C_2460032
I
0.885
fgenesh1_pg.scaffold_13000185
Physcomitrella patens
fgenesh1_pg.scaffold_13000185
I
0.885
mgf009119m
Mimulus guttatus
mgf009119m
I
0.879
Aquca_005_00425
Aquilegia coerulea
Aquca_005_00425
I
0.878
GLYMA13G36260
Glycine max
GLYMA13G36260
I
0.876
Bra029011
Brassica rapa
Bra029011
I
0.875
SELMODRAFT_165311
Selaginella moellendorffii
SELMODRAFT_165311
I
0.872
SELMODRAFT_165556
Selaginella moellendorffii
SELMODRAFT_165556
I
0.872
TCM_030082
Theobroma cacao
TCM_030082
I
0.872
GSMUA_Achr8G33180_001
Musa acuminata
GSMUA_Achr8G33180_001
I
0.870
Bo3g021940
Brassica oleracea
Bo3g021940
I
0.866
Ciclev10016381m.g
Citrus clementina
Ciclev10016381m.g
N
0.864
orange1.1g026646m.g
Citrus sinensis
orange1.1g026646m.g
N
0.864
AMTR_s00029p00112130
Amborella trichopoda
AMTR_s00029p00112130
N
0.860
VIT_00s0532g00050
Vitis vinifera
VIT_00s0532g00050
N
0.860
PDK_20s1322801g004
Phoenix dactylifera
PDK_20s1322801g004
N
0.860
GLYMA12G16560
Glycine max
GLYMA12G16560
N
0.856
Solyc07g064040.2
Solanum lycopersicum
Solyc07g064040.2
I
0.856
Gorai.002G081900
Gossypium raimondii
Gorai.002G081900
I
0.856
Gorai.013G164100
Gossypium raimondii
Gorai.013G164100
I
0.856
chr3.CM0155.80.nd
Lotus japonicus
chr3.CM0155.80.nd
N
0.856
MDP0000323291
Malus domestica
MDP0000323291
N
0.853
AMTR_s00098p00170370
Amborella trichopoda
AMTR_s00098p00170370
N
0.849
mgf012088m
Mimulus guttatus
mgf012088m
I
0.845
GLYMA15G06803
Glycine max
GLYMA15G06803
I
0.844
GLYMA15G06860
Glycine max
GLYMA15G06860
I
0.844
SapurV1A.0535s0060
Salix purpurea
SapurV1A.0535s0060
N
0.844
SapurV1A.3390s0010
Salix purpurea
SapurV1A.3390s0010
N
0.844
AMTR_s00009p00175450
Amborella trichopoda
AMTR_s00009p00175450
I
0.841
Gorai.002G016500
Gossypium raimondii
Gorai.002G016500
N
0.840