Bo3g021940 (Brassica oleracea)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Bo3g021940 T031115_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ILR3
M01714_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH7211 		0.866 0.904
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo3g021940.1 bHLH 75 126

Links

Other bHLH family TFs
Other Brassica oleracea TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra029011 Brassica rapa Bra029011 I 0.883
VIT_12s0059g02650 Vitis vinifera VIT_12s0059g02650 I 0.883
Aquca_005_00425 Aquilegia coerulea Aquca_005_00425 I 0.870
ILR3 Arabidopsis thaliana AT5G54680 D 0.866
Bra002964 Brassica rapa Bra002964 I 0.866
Bra022738 Brassica rapa Bra022738 I 0.866
ILR3 Arabidopsis lyrata fgenesh2_kg.8__1365__AT5G54680.1 I 0.866
GLYMA06G41620 Glycine max GLYMA06G41620 I 0.866
MTR_2g082640 Medicago truncatula MTR_2g082640 I 0.866
MTR_4g081370 Medicago truncatula MTR_4g081370 I 0.866
POPTR_0001s44230 Populus trichocarpa POPTR_0001s44230 I 0.866
POPTR_0011s13580 Populus trichocarpa POPTR_0011s13580 I 0.866
PRUPE_ppa009077mg Prunus persica PRUPE_ppa009077mg I 0.866
TCM_031118 Theobroma cacao TCM_031118 I 0.866
Ca_06956 Cicer arietinum Ca_06956 I 0.866
Ca_16355 Cicer arietinum Ca_16355 I 0.866
Cla001735 Citrullus lanatus Cla001735 I 0.866
Pm029465 Prunus mume Pm029465 I 0.866
28166.m001054 Ricinus communis 28166.m001054 I 0.866
cassava24574.valid.m1 Manihot esculenta cassava24574.valid.m1 I 0.866
cassava37031.valid.m1 Manihot esculenta cassava37031.valid.m1 I 0.866
cassava37032.valid.m1 Manihot esculenta cassava37032.valid.m1 I 0.866
Cucsa.267130 Cucumis sativus Cucsa.267130 I 0.866
Cucsa.267170 Cucumis sativus Cucsa.267170 I 0.866
Bostr.26833s0797 Boechera stricta Bostr.26833s0797 I 0.866
Cagra.1629s0040 Capsella grandiflora Cagra.1629s0040 I 0.866
Carubv10026758m.g Capsella rubella Carubv10026758m.g I 0.866
Ciclev10009354m.g Citrus clementina Ciclev10009354m.g I 0.866
Eucgr.F03420 Eucalyptus grandis Eucgr.F03420 I 0.866
evm.TU.supercontig_97.78 Carica papaya evm.TU.supercontig_97.78 I 0.866
gene03303-v1.0-hybrid Fragaria vesca gene03303-v1.0-hybrid I 0.866
gene24654-v1.0-hybrid Fragaria vesca gene24654-v1.0-hybrid I 0.866
Lus10011167.g Linum usitatissimum Lus10011167.g I 0.866
Lus10043076.g Linum usitatissimum Lus10043076.g I 0.866
MDP0000264803 Malus domestica MDP0000264803 I 0.866
orange1.1g026599m.g Citrus sinensis orange1.1g026599m.g I 0.866
SapurV1A.0712s0010 Salix purpurea SapurV1A.0712s0010 I 0.866
Thhalv10014564m.g Eutrema salsugineum Thhalv10014564m.g I 0.866
PK23013.1 Cannabis sativa PK23013.1 I 0.866
PRUPE_ppa010730mg Prunus persica PRUPE_ppa010730mg I 0.863
Ciclev10016381m.g Citrus clementina Ciclev10016381m.g N 0.857
orange1.1g026646m.g Citrus sinensis orange1.1g026646m.g N 0.857
GLYMA12G34300 Glycine max GLYMA12G34300 I 0.855
Gorai.007G314800 Gossypium raimondii Gorai.007G314800 N 0.851
GSMUA_Achr8G33180_001 Musa acuminata GSMUA_Achr8G33180_001 I 0.850
chr3.CM0155.80.nd Lotus japonicus chr3.CM0155.80.nd N 0.848
estExt_fgenesh1_pg.C_1360017 Physcomitrella patens estExt_fgenesh1_pg.C_1360017 I 0.844
fgenesh1_pg.scaffold_31000088 Physcomitrella patens fgenesh1_pg.scaffold_31000088 I 0.844