CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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amdR
(
Aspergillus nidulans
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
CADANIAG00004647
T361857_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
amdR
M01363_2.00
Aspergillus nidulans
NNCGGHNNNN
NNNNDCCGNN
PBM
Lambert et al.(2019)
pEX0227
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.537
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01363_2.00
Zinc cluster
18
59
AACVHCHRRKVRCDARLVGLPCSNCRSAGKTDCQIHEKKKKL
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADANIAP00004647
Zinc cluster
18
59
AACVHCHRRKVRCDARLVGLPCSNCRSAGKTDCQIHEKKKKL
Links
Other
Zinc cluster
family TFs
Other
Aspergillus nidulans
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy