CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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amdR
(
Aspergillus nidulans
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
CADANIAG00004647
T361857_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
amdR
M01363_2.00
Aspergillus nidulans
NNCGGHNNNN
NNNNDCCGNN
PBM
Lambert et al.(2019)
pEX0227
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.537
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01363_2.00
Zinc cluster
18
59
AACVHCHRRKVRCDARLVGLPCSNCRSAGKTDCQIHEKKKKL
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADANIAP00004647
Zinc cluster
18
59
AACVHCHRRKVRCDARLVGLPCSNCRSAGKTDCQIHEKKKKL
Links
Other
Zinc cluster
family TFs
Other
Aspergillus nidulans
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ARB_01305
Arthroderma benhamiae
ARB_01305
I
0.616
BDDG_02000
Blastomyces dermatitidis
BDDG_02000
I
0.633
ACLA_030720
Aspergillus clavatus
CADACLAG00002636
I
0.636
CADAFLAG00002231
Aspergillus flavus
CADAFLAG00002231
I
0.564
AFUA_1G03860
Aspergillus fumigatus
CADAFUAG00008577
I
0.636
CADANGAG00000260
Aspergillus niger
CADANGAG00000260
I
0.636
CADAORAG00001528
Aspergillus oryzae
CADAORAG00001528
I
0.564
ATEG_03826
Aspergillus terreus
CADATEAG00009146
I
0.636
NFIA_020820
Neosartorya fischeri
CADNFIAG00001564
I
0.636
CIMG_04625
Coccidioides immitis
CIMG_04625
I
0.617
CPC735_071800
Coccidioides posadasii
CPC735_071800
I
0.617
EURHEDRAFT_457629
Aspergillus ruber
EURHEDRAFT_457629
I
0.619
e_gw1.00129.103.1
Aspergillus carbonarius
e_gw1.00129.103.1
I
0.636
H102_03399
Trichophyton rubrum
H102_03399
I
0.616
H105_03416
Trichophyton soudanense
H105_03416
I
0.616
H105_03420
Trichophyton soudanense
H105_03420
I
0.616
HCBG_00538
Histoplasma capsulatum
HCBG_00538
I
0.633
MCYG_05808
Microsporum canis
MCYG_05808
I
0.616
MCYG_05808
Arthroderma otae
MCYG_05808
I
0.616
PAAG_05745
Paracoccidioides sp lutzii
PAAG_05745
I
0.633
PABG_06313
Paracoccidioides brasiliensis
PABG_06313
I
0.561
Pc16g08250
Penicillium chrysogenum
Pc16g08250
I
0.556
PCH_Pc16g08250
Penicillium rubens
PCH_Pc16g08250
I
0.556
PDE_02833
Penicillium oxalicum
PDE_02833
I
0.619
PDIP_21350
Penicillium digitatum
PDIP_21350
I
0.601
PEX1_002190
Penicillium expansum
PEX1_002190
I
0.601
PITC_030840
Penicillium italicum
PITC_030840
I
0.601
PMAA_055050
Talaromyces marneffei
PMAA_055050
I
0.608
PMAA_055050
Penicillium marneffei
PMAA_055050
I
0.608
TESG_08028
Trichophyton tonsurans
TESG_08028
I
0.616
TSTA_017820
Talaromyces stipitatus
TSTA_017820
I
0.608
U727_00433100421
Penicillium solitum
U727_00433100421
I
0.601
UREG_01825
Uncinocarpus reesii
UREG_01825
I
0.600