CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GGTG_10884
(
Gaeumannomyces graminis
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
GGTG_10884
T369387_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU05414
M01426_2.00
Neurospora crassa
KCGSNWRN
NYWNSCGM
PBM
Lambert et al.(2019)
pTH8862
0.560
0.692
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GGTG_10884T0
Zinc cluster
19
58
AGCTSCKEKKKKCDEERPKCARCAERGGDCVYEPVRPRQR
Links
Other
Zinc cluster
family TFs
Other
Gaeumannomyces graminis
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cob_08366
Colletotrichum orbiculare
Cob_08366
N
0.548
MAPG_00097
Magnaporthe poae
MAPG_00097
I
0.654
MGG_06954
Magnaporthe oryzae
MGG_06954
I
0.592
NCU05414
Neurospora crassa
NCU05414
D
0.560
VDAG_07703
Verticillium dahliae
VDAG_07703
I
0.568
VDBG_05770
Verticillium albo atrum
VDBG_05770
I
0.568
VDBG_05770
Verticillium alfalfae
VDBG_05770
I
0.568