CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NCU05414
(
Neurospora crassa
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
NCU05414
T390611_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU05414
M01426_2.00
Neurospora crassa
KCGSNWRN
NYWNSCGM
PBM
Lambert et al.(2019)
pTH8862
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.537
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01426_2.00
Zinc cluster
26
65
AGCTFCKEKKKKCDEGRPQCSRCVEHGATCIYEALRPRRR
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCU05414
Zinc cluster
26
65
AGCTFCKEKKKKCDEGRPQCSRCVEHGATCIYEALRPRRR
Links
Other
Zinc cluster
family TFs
Other
Neurospora crassa
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDBG_05770
Verticillium albo atrum
VDBG_05770
I
0.564
VDAG_07703
Verticillium dahliae
VDAG_07703
I
0.564
VDBG_05770
Verticillium alfalfae
VDBG_05770
I
0.564
GGTG_10884
Gaeumannomyces graminis
GGTG_10884
I
0.560
MAPG_00097
Magnaporthe poae
MAPG_00097
I
0.560
MGG_06954
Magnaporthe oryzae
MGG_06954
I
0.547