CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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KAFR_0G01220
(
Kazachstania africana
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
KAFR_0G01220
T371676_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
URC2
M00083_2.00
Saccharomyces cerevisiae
CGGVNWWHNN
NNDWWNBCCG
PBM
Badis et al.(2008)
YDR520c_2043
0.600
0.641
URC2
M01578_2.00
Saccharomyces cerevisiae
NNNNNNNNDN
NHNNNNNNNN
PBM
Zhu et al.(2009)
Ydr520c
0.600
0.641
URC2
M07510_2.00
Saccharomyces cerevisiae
HCGGANWTAN
NTAWNTCCGD
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0422.1
0.600
0.641
URC2
M08659_2.00
Saccharomyces cerevisiae
HCGGANWTAN
NTAWNTCCGD
Misc
DeBoer et al.(2011)
YDR520C_553
0.600
0.641
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCF59156
Zinc cluster
90
130
FSCDTCRKFKTRCDFEPLLGKCHRCGVLNIDCSLTKEREDE
Links
Other
Zinc cluster
family TFs
Other
Kazachstania africana
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CG17802
Drosophila melanogaster
FBgn0038549
D
GG16749
Drosophila erecta
FBgn0108979
I
GD20209
Drosophila simulans
FBgn0191687
I
GE25244
Drosophila yakuba
FBgn0242327
I