LACBIDRAFT_254611 (Laccaria bicolor)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 LACBIDRAFT_254611 T372072_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
aod-2
M02599_2.00 		Neurospora crassa
NNNNCGGRN
NYCCGNNNN		 PBM
Weirauch et al.(2014)
pTH8944 		0.571 0.784
SCHCODRAFT_110010
M01418_2.00 		Schizophyllum commune
NWYCGGAABN
NVTTCCGRWN		 PBM
Lambert et al.(2019)
pTH9839 		0.540 0.865
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EDR01523 Zinc cluster 9 47

Links

Other Zinc cluster family TFs
Other Laccaria bicolor TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo00779s020 Brassica oleracea Bo00779s020 N
Bo1g118840 Brassica oleracea Bo1g118840 N
Bra030459 Brassica rapa Bra030459 N
BRADI2G23520 Brachypodium distachyon BRADI2G23520 N
Ca_14144 Cicer arietinum Ca_14144 N
chr3.CM0155.80.nd Lotus japonicus chr3.CM0155.80.nd N
Cla010679 Citrullus lanatus Cla010679 N
Cucsa.072940 Cucumis sativus Cucsa.072940 N
GLYMA13G38140 Glycine max GLYMA13G38140 N
MDP0000323291 Malus domestica MDP0000323291 N
OB05G26550 Oryza brachyantha OB05G26550 N
Pavir.J15729 Panicum virgatum Pavir.J15729 N
PGSC0003DMG400026168 Solanum tuberosum PGSC0003DMG400026168 N
Sb09g022280 Sorghum bicolor Sb09g022280 N
Si023133m.g Setaria italica Si023133m.g N
Solyc07g052670.2 Solanum lycopersicum Solyc07g052670.2 N
Thhalv10011752m.g Eutrema salsugineum Thhalv10011752m.g N