CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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V499_08273
(
Pseudogymnoascus pannorum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
V499_08273
T387107_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
clr-1
M02626_2.00
Neurospora crassa
NNNHTCCGGAWNN
NNWTCCGGADNNN
PBM
Weirauch et al.(2014)
pTH8805
0.602
0.895
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KFY71530
Zinc cluster
126
163
IACEICRSRKSRCDGSKPKCRLCVELGAECIYREPGIK
Links
Other
Zinc cluster
family TFs
Other
Pseudogymnoascus pannorum
TFs
71 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DILT_0001004901
Diphyllobothrium latum
DILT_0001004901
N
EmuJ_000419500
Echinococcus multilocularis
EmuJ_000419500
N
HmN_000865600
Hymenolepis microstoma
HmN_000865600
N
MCOS_0000070201
Mesocestoides corti
MCOS_0000070201
N
Sjc_0040590
Schistosoma japonicum
Sjc_0040590
N
Smp_073680
Schistosoma mansoni
Smp_073680
N
SMTD_0001467001
Schistosoma mattheei
SMTD_0001467001
N
SROB_0001853501
Schistosoma rodhaini
SROB_0001853501
N
SSLN_0000810201
Schistocephalus solidus
SSLN_0000810201
N
T265_05686
Opisthorchis viverrini
T265_05686
N
TASK_0000929501
Taenia asiatica
TASK_0000929501
N
TRE_0001104801
Trichobilharzia regenti
TRE_0001104801
N
TsM_000321300
Taenia solium
TsM_000321300
N
TTAC_0000046901
Hydatigera taeniaeformis
TTAC_0000046901
N