VDBG_01336 (Verticillium alfalfae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 VDBG_01336 T387457_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU08527
M02627_2.00 		Neurospora crassa
NKYCGGCGNNN
NNNCGCCGRMN		 PBM
Weirauch et al.(2014)
pTH8938 		0.549 0.744
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EEY15227 Zinc cluster 13 53

Links

Other Zinc cluster family TFs
Other Verticillium alfalfae TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_185241 Agaricus bisporus AGABI2DRAFT_185241 N
CC1G_02044 Coprinopsis cinerea CC1G_02044 N
CY34DRAFT_24942 Suillus luteus CY34DRAFT_24942 N
GALMADRAFT_226967 Galerina marginata GALMADRAFT_226967 N
Genemark.6330_g Heterobasidion annosum Genemark.6330_g N
K443DRAFT_127765 Laccaria amethystina K443DRAFT_127765 N
LACBIDRAFT_296436 Laccaria bicolor LACBIDRAFT_296436 N
M378DRAFT_70441 Amanita muscaria M378DRAFT_70441 N
M404DRAFT_950511 Pisolithus tinctorius M404DRAFT_950511 N
M413DRAFT_329591 Hebeloma cylindrosporum M413DRAFT_329591 N
Moror_16312 Moniliophthora roreri Moror_16312 N
PAXRUDRAFT_831648 Paxillus rubicundulus PAXRUDRAFT_831648 N
PHACADRAFT_257807 Phanerochaete carnosa PHACADRAFT_257807 N
PILCRDRAFT_823901 Piloderma croceum PILCRDRAFT_823901 N
PISMIDRAFT_674167 Pisolithus microcarpus PISMIDRAFT_674167 N
PLEOSDRAFT_1089566 Pleurotus ostreatus PLEOSDRAFT_1089566 N
POSPLDRAFT_102661 Postia placenta POSPLDRAFT_102661 N
SCLCIDRAFT_1222613 Scleroderma citrinum SCLCIDRAFT_1222613 N