STB5 (Saccharomyces cerevisiae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 YHR178W T388350_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
STB5
M00087_2.00		 Saccharomyces cerevisiae
NCGGNNHKWN
NWMDNNCCGN		 PBM
Badis et al.(2008)
STB5_4529		 (Direct) (Direct)
STB5
M00923_2.00		 Saccharomyces cerevisiae
NCGGNNNHWN
NWDNNNCCGN		 PBM
Gordan et al.(2011)
Stb5		 (Direct) (Direct)
STB5
M07514_2.00		 Saccharomyces cerevisiae
CGGNVHTA
TADBNCCG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0392.1		 (Direct) (Direct)
STB5
M08664_2.00		 Saccharomyces cerevisiae
CGGNVHKW
WMDBNCCG		 Misc
DeBoer et al.(2011)
YHR178W_1405		 (Direct) (Direct)
STB5
M08665_2.00		 Saccharomyces cerevisiae
BCNGCGGN
NCCGCNGV		 Misc
DeBoer et al.(2011)
YHR178W_2068		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.537 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00087_2.00 Zinc cluster 19 57
M00923_2.00 Zinc cluster 20 58

DNA Binding Domains

Protein ID Domain From To Sequence
YHR178W Zinc cluster 20 58

Links

Other Zinc cluster family TFs
Other Saccharomyces cerevisiae TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action