STB5 (Saccharomyces cerevisiae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 YHR178W T388350_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Enables DNA-binding transcription factor activity. Involved in regulation of transcription from RNA polymerase II promoter in response to oxidative stress; response to xenobiotic stimulus; and transcription elongation from RNA polymerase II promoter. Predicted to be located in nucleus. [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
STB5
M00087_2.00		 Saccharomyces cerevisiae
NCGGNNHKWN
NWMDNNCCGN		 PBM
Badis et al.(2008)
STB5_4529		 (Direct) (Direct)
STB5
M00923_2.00		 Saccharomyces cerevisiae
NCGGNNNHWN
NWDNNNCCGN		 PBM
Gordan et al.(2011)
Stb5		 (Direct) (Direct)
STB5
M07514_2.00		 Saccharomyces cerevisiae
CGGNVHTA
TADBNCCG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0392.1		 (Direct) (Direct)
STB5
M08664_2.00		 Saccharomyces cerevisiae
CGGNVHKW
WMDBNCCG		 Misc
DeBoer et al.(2011)
YHR178W_1405		 (Direct) (Direct)
STB5
M08665_2.00		 Saccharomyces cerevisiae
BCNGCGGN
NCCGCNGV		 Misc
DeBoer et al.(2011)
YHR178W_2068		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.537 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00087_2.00 Zinc cluster 19 57
M00923_2.00 Zinc cluster 20 58

DNA Binding Domains

Protein ID Domain From To Sequence
YHR178W Zinc cluster 20 58

Links

Other Zinc cluster family TFs
Other Saccharomyces cerevisiae TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
10288_YHR178W Saccharomyces mikatae 10288_YHR178W I 0.683
9716_YHR178W Saccharomyces paradoxus 9716_YHR178W I 0.667
10973_YHR178W Saccharomyces bayanus 10973_YHR178W I 0.666
SKUD_204609 Saccharomyces kudriavzevii SKUD_204609 I 0.654
SU7_1531 Saccharomyces arboricola SU7_1531 I 0.653
LALA0_S07e04368g Lachancea lanzarotensis LALA0_S07e04368g I 0.566
ZYRO0C11880g Zygosaccharomyces rouxii ZYRO0C11880g I 0.549