CEP3 (Saccharomyces cerevisiae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 YMR168C T388370_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Enables DNA binding activity, bending and centromeric DNA binding activity. Involved in mitotic spindle assembly checkpoint signaling and septin ring assembly. Located in kinetochore. Part of CBF3 complex. [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CEP3
M00101_2.00		 Saccharomyces cerevisiae
BCTCGGRA
TYCCGAGV		 PBM
Badis et al.(2008)
CEP3_2090		 (Direct) (Direct)
CEP3
M01591_2.00		 Saccharomyces cerevisiae
YTCGGAAA
TTTCCGAR		 PBM
Zhu et al.(2009)
Cep3		 (Direct) (Direct)
CEP3
M07528_2.00		 Saccharomyces cerevisiae
YTCGGAAN
NTTCCGAR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0282.1		 (Direct) (Direct)
CEP3
M08687_2.00		 Saccharomyces cerevisiae
YTCGGAAN
NTTCCGAR		 Misc
DeBoer et al.(2011)
YMR168C_524		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.537 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00101_2.00 Zinc cluster 11 50
M01591_2.00 Zinc cluster 12 51

DNA Binding Domains

Protein ID Domain From To Sequence
YMR168C Zinc cluster 12 51

Links

Other Zinc cluster family TFs
Other Saccharomyces cerevisiae TFs

Invalid Input OrderBy

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action