CEP3 (Saccharomyces cerevisiae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 YMR168C T388370_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Enables DNA binding activity, bending and centromeric DNA binding activity. Involved in mitotic spindle assembly checkpoint signaling and septin ring assembly. Located in kinetochore. Part of CBF3 complex. [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CEP3
M00101_2.00		 Saccharomyces cerevisiae
BCTCGGRA
TYCCGAGV		 PBM
Badis et al.(2008)
CEP3_2090		 (Direct) (Direct)
CEP3
M01591_2.00		 Saccharomyces cerevisiae
YTCGGAAA
TTTCCGAR		 PBM
Zhu et al.(2009)
Cep3		 (Direct) (Direct)
CEP3
M07528_2.00		 Saccharomyces cerevisiae
YTCGGAAN
NTTCCGAR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0282.1		 (Direct) (Direct)
CEP3
M08687_2.00		 Saccharomyces cerevisiae
YTCGGAAN
NTTCCGAR		 Misc
DeBoer et al.(2011)
YMR168C_524		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.537 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00101_2.00 Zinc cluster 11 50
M01591_2.00 Zinc cluster 12 51

DNA Binding Domains

Protein ID Domain From To Sequence
YMR168C Zinc cluster 12 51

Links

Other Zinc cluster family TFs
Other Saccharomyces cerevisiae TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
17034_YMR168C Saccharomyces mikatae 17034_YMR168C I 0.643
16659_YMR168C Saccharomyces paradoxus 16659_YMR168C I 0.564
18903_YMR168C Saccharomyces bayanus 18903_YMR168C I 0.549