CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw1.18.1704.1
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
e_gw1.18.1704.1
T389384_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.18.1704.1
Zinc cluster
24
63
SGCLTCRTKHLKCDETKPNCQLCLSRGIKCGGYNRGLKWS
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29646.m001068
Ricinus communis
29646.m001068
I
30068.m002661
Ricinus communis
30068.m002661
I
AMTR_s00048p00108400
Amborella trichopoda
AMTR_s00048p00108400
I
AMTR_s00059p00094730
Amborella trichopoda
AMTR_s00059p00094730
I
BZIP68
Arabidopsis thaliana
AT1G32150
D
BZIP16
Arabidopsis thaliana
AT2G35530
D
GBF1
Arabidopsis thaliana
AT4G36730
D
BGIOSGA036419
Oryza indica
BGIOSGA036419
I
Bo1g005460
Brassica oleracea
Bo1g005460
I
Bo4g038560
Brassica oleracea
Bo4g038560
I
Bo4g183320
Brassica oleracea
Bo4g183320
I
Bostr.23794s0549
Boechera stricta
Bostr.23794s0549
I
Bostr.3359s0141
Boechera stricta
Bostr.3359s0141
I
Bostr.7867s1529
Boechera stricta
Bostr.7867s1529
I
Bra005335
Brassica rapa
Bra005335
I
Bra010572
Brassica rapa
Bra010572
I
Bra011701
Brassica rapa
Bra011701
I
Cagra.0993s0063
Capsella grandiflora
Cagra.0993s0063
I
Cagra.3359s0011
Capsella grandiflora
Cagra.3359s0011
I
Cagra.5996s0003
Capsella grandiflora
Cagra.5996s0003
I
Carubv10005287m.g
Capsella rubella
Carubv10005287m.g
I
cassava11837.valid.m1
Manihot esculenta
cassava11837.valid.m1
I
cassava37043.valid.m1
Manihot esculenta
cassava37043.valid.m1
I
cassava45491.m1
Manihot esculenta
cassava45491.m1
I
Ca_01293
Cicer arietinum
Ca_01293
I
Ca_11455
Cicer arietinum
Ca_11455
I
Ca_15839
Cicer arietinum
Ca_15839
I
chr1.CM0579.280.nd
Lotus japonicus
chr1.CM0579.280.nd
I
chr2.LjT41P23.50.nc
Lotus japonicus
chr2.LjT41P23.50.nc
I
Ciclev10001333m.g
Citrus clementina
Ciclev10001333m.g
I
Ciclev10025963m.g
Citrus clementina
Ciclev10025963m.g
I
Cla008988
Citrullus lanatus
Cla008988
I
Cla014415
Citrullus lanatus
Cla014415
I
Cla016502
Citrullus lanatus
Cla016502
I
Cucsa.104970
Cucumis sativus
Cucsa.104970
I
Cucsa.312800
Cucumis sativus
Cucsa.312800
I
Cucsa.322110
Cucumis sativus
Cucsa.322110
I
estExt_fgenesh1_pg.C_10522
Micromonas pusilla
estExt_fgenesh1_pg.C_10522
I
estExt_fgenesh2_pg.C_Chr_020452
Micromonas sp RCC299
estExt_fgenesh2_pg.C_Chr_020452
I
Eucgr.E00223
Eucalyptus grandis
Eucgr.E00223
I
Eucgr.H01256
Eucalyptus grandis
Eucgr.H01256
I
evm.TU.supercontig_158.7
Carica papaya
evm.TU.supercontig_158.7
I
evm.TU.supercontig_2741.1
Carica papaya
evm.TU.supercontig_2741.1
I
bZIP68
Arabidopsis lyrata
fgenesh2_kg.1__3350__AT1G32150.1
I
gene13716-v1.0-hybrid
Fragaria vesca
gene13716-v1.0-hybrid
I
gene18928-v1.0-hybrid
Fragaria vesca
gene18928-v1.0-hybrid
I
gene29546-v1.0-hybrid
Fragaria vesca
gene29546-v1.0-hybrid
I
GLYMA01G01740
Glycine max
GLYMA01G01740
I
GLYMA01G38381
Glycine max
GLYMA01G38381
I
GLYMA02G06550
Glycine max
GLYMA02G06550
I
GLYMA08G34280
Glycine max
GLYMA08G34280
I
GLYMA09G34170
Glycine max
GLYMA09G34170
I
GLYMA16G15810
Glycine max
GLYMA16G15810
I
GLYMA16G25600
Glycine max
GLYMA16G25600
I
Gorai.003G185700
Gossypium raimondii
Gorai.003G185700
I
Gorai.004G181900
Gossypium raimondii
Gorai.004G181900
I
Gorai.007G205700
Gossypium raimondii
Gorai.007G205700
I
Gorai.008G068900
Gossypium raimondii
Gorai.008G068900
I
GRMZM2G019106
Zea mays
GRMZM2G019106
I
GRMZM2G074373
Zea mays
GRMZM2G074373
I
GRMZM2G153144
Zea mays
GRMZM2G153144
I
GSMUA_AchrUn_randomG02860_001
Musa acuminata
GSMUA_AchrUn_randomG02860_001
I
gw2.11.550.1
Micromonas sp RCC299
gw2.11.550.1
I
LjSGA_036158.1
Lotus japonicus
LjSGA_036158.1
I
LPERR12G05920
Leersia perrieri
LPERR12G05920
I
Lus10014324.g
Linum usitatissimum
Lus10014324.g
I
Lus10026033.g
Linum usitatissimum
Lus10026033.g
I
MDP0000185553
Malus domestica
MDP0000185553
I
MDP0000231274
Malus domestica
MDP0000231274
I
MDP0000286846
Malus domestica
MDP0000286846
I
mgf000639m
Mimulus guttatus
mgf000639m
I
mgf005151m
Mimulus guttatus
mgf005151m
I
mgf008195m
Mimulus guttatus
mgf008195m
I
mgf008605m
Mimulus guttatus
mgf008605m
I
mgf013375m
Mimulus guttatus
mgf013375m
I
mgf014804m
Mimulus guttatus
mgf014804m
I
MTR_5g028850
Medicago truncatula
MTR_5g028850
I
MTR_7g116890
Medicago truncatula
MTR_7g116890
I
MTR_8g070820
Medicago truncatula
MTR_8g070820
I
MTR_8g077950
Medicago truncatula
MTR_8g077950
I
OB12G16310
Oryza brachyantha
OB12G16310
I
OBART12G06770
Oryza barthii
OBART12G06770
I
OGLUM12G08090
Oryza glumaepatula
OGLUM12G08090
I
OLONG_021967
Oryza longistaminata
OLONG_021967
I
OMERI12G04560
Oryza meridionalis
OMERI12G04560
I
ONIVA12G06500
Oryza nivara
ONIVA12G06500
I
OPUNC12G06450
Oryza punctata
OPUNC12G06450
I
orange1.1g018605m.g
Citrus sinensis
orange1.1g018605m.g
I
orange1.1g036551m.g
Citrus sinensis
orange1.1g036551m.g
I
ORGLA12G0063500
Oryza glaberrima
ORGLA12G0063500
I
ORUFI12G07600
Oryza rufipogon
ORUFI12G07600
I
Pavir.Aa03436
Panicum virgatum
Pavir.Aa03436
I
Pavir.Ab00132
Panicum virgatum
Pavir.Ab00132
I
Pavir.Ca00403
Panicum virgatum
Pavir.Ca00403
I
Pavir.Cb01814
Panicum virgatum
Pavir.Cb01814
I
PDK_20s1310372g001
Phoenix dactylifera
PDK_20s1310372g001
I
PDK_20s1368181g001
Phoenix dactylifera
PDK_20s1368181g001
I
PDK_20s1372692g002
Phoenix dactylifera
PDK_20s1372692g002
I
PGSC0003DMG400012660
Solanum tuberosum
PGSC0003DMG400012660
I
PGSC0003DMG400018469
Solanum tuberosum
PGSC0003DMG400018469
I
PK23964.1
Cannabis sativa
PK23964.1
D
Pm023132
Prunus mume
Pm023132
I
Pm026586
Prunus mume
Pm026586
I
POPTR_0001s01840
Populus trichocarpa
POPTR_0001s01840
I
POPTR_0003s09630
Populus trichocarpa
POPTR_0003s09630
I
POPTR_0005s12750
Populus trichocarpa
POPTR_0005s12750
I
POPTR_0007s12460
Populus trichocarpa
POPTR_0007s12460
I
PRUPE_ppa006484mg
Prunus persica
PRUPE_ppa006484mg
I
PRUPE_ppa008024mg
Prunus persica
PRUPE_ppa008024mg
I
SapurV1A.0051s0250
Salix purpurea
SapurV1A.0051s0250
I
SapurV1A.0063s0130
Salix purpurea
SapurV1A.0063s0130
I
SapurV1A.0255s0070
Salix purpurea
SapurV1A.0255s0070
I
SapurV1A.0817s0110
Salix purpurea
SapurV1A.0817s0110
I
Sb04g002360
Sorghum bicolor
Sb04g002360
I
Sb08g008300
Sorghum bicolor
Sb08g008300
I
GBF1
Arabidopsis lyrata
scaffold_700433.1
I
SELMODRAFT_135978
Selaginella moellendorffii
SELMODRAFT_135978
I
Si017637m.g
Setaria italica
Si017637m.g
I
Si022325m.g
Setaria italica
Si022325m.g
I
Solyc02g062950.2
Solanum lycopersicum
Solyc02g062950.2
I
Solyc02g085610.2
Solanum lycopersicum
Solyc02g085610.2
I
Solyc08g005290.2
Solanum lycopersicum
Solyc08g005290.2
I
Solyc08g076100.2
Solanum lycopersicum
Solyc08g076100.2
I
TCM_000436
Theobroma cacao
TCM_000436
I
TCM_016606
Theobroma cacao
TCM_016606
I
Thhalv10007879m.g
Eutrema salsugineum
Thhalv10007879m.g
I
Thhalv10016740m.g
Eutrema salsugineum
Thhalv10016740m.g
I
Thhalv10025733m.g
Eutrema salsugineum
Thhalv10025733m.g
I
VIT_02s0012g02250
Vitis vinifera
VIT_02s0012g02250
I
GBF1
Vitis vinifera
VIT_04s0023g01360
I
VIT_18s0001g12120
Vitis vinifera
VIT_18s0001g12120
I