e_gw1.9.140.1 (Cochliobolus heterostrophus C5)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 e_gw1.9.140.1 T389518_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
aod-2
M02599_2.00 		Neurospora crassa
NNNNCGGRN
NYCCGNNNN		 PBM
Weirauch et al.(2014)
pTH8944 		0.549 0.886
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.9.140.1 Zinc cluster 49 85

Links

Other Zinc cluster family TFs
Other Cochliobolus heterostrophus C5 TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29685.m000503 Ricinus communis 29685.m000503 N
29889.m003255 Ricinus communis 29889.m003255 N
Aquca_008_00101 Aquilegia coerulea Aquca_008_00101 N
FRS11 Arabidopsis thaliana AT1G10240 N
BGIOSGA012540 Oryza indica BGIOSGA012540 N
Bo5g010680 Brassica oleracea Bo5g010680 N
Bostr.13671s0465 Boechera stricta Bostr.13671s0465 N
BRADI5G11330 Brachypodium distachyon BRADI5G11330 N
Cagra.4395s0212 Capsella grandiflora Cagra.4395s0212 N
Carubv10012599m.g Capsella rubella Carubv10012599m.g N
cassava28226.m1 Manihot esculenta cassava28226.m1 N
Ciclev10000456m.g Citrus clementina Ciclev10000456m.g N
Ciclev10004395m.g Citrus clementina Ciclev10004395m.g N
Cucsa.019230 Cucumis sativus Cucsa.019230 N
Eucgr.G00085 Eucalyptus grandis Eucgr.G00085 N
evm.TU.supercontig_113.2 Carica papaya evm.TU.supercontig_113.2 N
evm.TU.supercontig_151.57 Carica papaya evm.TU.supercontig_151.57 N
gene05172-v1.0-hybrid Fragaria vesca gene05172-v1.0-hybrid N
gene29088-v1.0-hybrid Fragaria vesca gene29088-v1.0-hybrid N
GLYMA09G04394 Glycine max GLYMA09G04394 N
GLYMA10G00380 Glycine max GLYMA10G00380 N
GLYMA15G15450 Glycine max GLYMA15G15450 N
Gorai.006G118900 Gossypium raimondii Gorai.006G118900 N
MDP0000233216 Malus domestica MDP0000233216 N
MDP0000234814 Malus domestica MDP0000234814 N
MDP0000786741 Malus domestica MDP0000786741 N
MLOC_15705 Hordeum vulgare MLOC_15705 N
OB04G20960 Oryza brachyantha OB04G20960 N
orange1.1g004420m.g Citrus sinensis orange1.1g004420m.g N
orange1.1g047253m.g Citrus sinensis orange1.1g047253m.g N
ORGLA04G0107700 Oryza glaberrima ORGLA04G0107700 N
OS04G0443000 Oryza sativa OS04G0443000 N
PDK_20s1635961g004 Phoenix dactylifera PDK_20s1635961g004 N
PDK_20s1756181g001 Phoenix dactylifera PDK_20s1756181g001 N
PK06148.1 Cannabis sativa PK06148.1 N
PK12746.1 Cannabis sativa PK12746.1 N
Pm003854 Prunus mume Pm003854 N
Pm008290 Prunus mume Pm008290 N
POPTR_0002s20030 Populus trichocarpa POPTR_0002s20030 N
POPTR_0004s23620 Populus trichocarpa POPTR_0004s23620 N
PRUPE_ppa002003mg Prunus persica PRUPE_ppa002003mg N
PRUPE_ppa002379mg Prunus persica PRUPE_ppa002379mg N
SapurV1A.0158s0480 Salix purpurea SapurV1A.0158s0480 N
SapurV1A.0225s0240 Salix purpurea SapurV1A.0225s0240 N
Sb06g017580 Sorghum bicolor Sb06g017580 N
Si012297m.g Setaria italica Si012297m.g N
Solyc01g103180.2 Solanum lycopersicum Solyc01g103180.2 N
TCM_041141 Theobroma cacao TCM_041141 N
Thhalv10006984m.g Eutrema salsugineum Thhalv10006984m.g N
Traes_2AL_9A4A7514E Triticum aestivum Traes_2AL_9A4A7514E N
Traes_2BL_C1DE13045 Triticum aestivum Traes_2BL_C1DE13045 N
TRIUR3_11057 Triticum urartu TRIUR3_11057 N
VIT_05s0077g01400 Vitis vinifera VIT_05s0077g01400 N
VIT_07s0005g01120 Vitis vinifera VIT_07s0005g01120 N
VIT_12s0035g01360 Vitis vinifera VIT_12s0035g01360 N