e_gww1.1.1.1491.1 (Pichia stipitis)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 e_gww1.1.1.1491.1 T389538_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARG81
M08441_2.00 		Saccharomyces cerevisiae
DTGACTCH
DGAGTCAH		 ChIP-chip
Mathelier et al.(2014)
MA0272.1 		0.569 0.775
ARG81
M08685_2.00 		Saccharomyces cerevisiae
CGGYVKCGG
CCGMBRCCG		 Misc
DeBoer et al.(2011)
YML099C_1506 		0.569 0.775
ARG81
M11484_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ARGRII_01 		0.569 0.775
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gww1.1.1.1491.1 Zinc cluster 9 48

Links

Other Zinc cluster family TFs
Other Pichia stipitis TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMEM007577 Anopheles merus AMEM007577 N 0.000
ANCDUO_13707 Ancylostoma duodenale ANCDUO_13707 N 0.000
Bm4268 Brugia malayi Bm4268 N 0.000
CGI_10022678 Crassostrea gigas CGI_10022678 N 0.000
EEL_0000200601 Elaeophora elaphi EEL_0000200601 N 0.000
MYT1L Callithrix jacchus ENSCJAG00000007286 N 0.000
MYT1L Homo sapiens ENSG00000186487 I 0.000
MYT1L Macaca mulatta ENSMMUG00000009310 I 0.000
estExt_fgenesh2_pg.C_5980016 Branchiostoma floridae estExt_fgenesh2_pg.C_5980016 N 0.000
estExt_gwp.C_5980021 Branchiostoma floridae estExt_gwp.C_5980021 N 0.000
GPLIN_000814800 Globodera pallida GPLIN_000814800 N 0.000
GPLIN_001349600 Globodera pallida GPLIN_001349600 N 0.000
HPBE_0001834901 Heligmosomoides bakeri HPBE_0001834901 N 0.000
L892_g7301 Steinernema scapterisci L892_g7301 N 0.000
L898_g12863 Steinernema monticolum L898_g12863 N 0.000
maker-nMf.1.1.scaf02509-snap-gene-0.6 Meloidogyne floridensis maker-nMf.1.1.scaf02509-snap-gene-0.6 N 0.000
MESCA002178 Megaselia scalaris MESCA002178 N 0.000
nAv.1.0.1.g04361 Acanthocheilonema viteae nAv.1.0.1.g04361 N 0.000
Ocbimv22011176m.g Octopus bimaculoides Ocbimv22011176m.g N 0.000
PPAI004584 Phlebotomus papatasi PPAI004584 N 0.000
PXEA_0001827501 Protopolystoma xenopodis PXEA_0001827501 N 0.000
SVUK_0001589601 Strongylus vulgaris SVUK_0001589601 N 0.000
TsM_000155300 Taenia solium TsM_000155300 N 0.000
WUBG_11438 Wuchereria bancrofti WUBG_11438 N 0.000