CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pg.C_sca_41_chr12_2_00090
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_fgenesh1_pg.C_sca_41_chr12_2_00090
T389654_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pg.C_sca_41_chr12_2_00090
Zinc cluster
15
41
VCDETRPKCLSCVQRGVECGGYERRIA
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BDDG_07110
Blastomyces dermatitidis
BDDG_07110
N
0.548
ACLA_088930
Aspergillus clavatus
CADACLAG00008857
N
0.592
CHGG_00926
Chaetomium globosum
CHGG_00926
N
0.570
e_gw1.34.5.1
Cochliobolus heterostrophus C5
e_gw1.34.5.1
N
0.576
MCYG_00717
Microsporum canis
MCYG_00717
N
0.549
MPH_11049
Macrophomina phaseolina
MPH_11049
N
0.575
NechaG102087
Fusarium solani
NechaG102087
N
0.683
PEX1_085400
Penicillium expansum
PEX1_085400
N
0.551
PV06_08153
Exophiala oligosperma
PV06_08153
N
0.553
S40285_04043
Stachybotrys chlorohalonata
S40285_04043
N
0.545
S40285_09207
Stachybotrys chlorohalonata
S40285_09207
N
0.546
SAPIO_CDS3191
Scedosporium apiospermum
SAPIO_CDS3191
N
0.578
SBOR_2893
Sclerotinia borealis
SBOR_2893
N
0.545
TSTA_058560
Talaromyces stipitatus
TSTA_058560
N
0.546
U727_00433130301
Penicillium solitum
U727_00433130301
N
0.573
VDAG_07640
Verticillium dahliae
VDAG_07640
N
0.541
VDBG_01807
Verticillium alfalfae
VDBG_01807
N
0.560
VDBG_01807
Verticillium albo atrum
VDBG_01807
N
0.560
Z518_08215
Rhinocladiella mackenziei
Z518_08215
N
0.566