CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
estExt_fgeneshNG_pg.C_20054
(
Naegleria gruberi
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_fgeneshNG_pg.C_20054
T389748_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgeneshNG_pg.C_20054
Zinc cluster
100
139
VACVYCNKLHKKCDGEPPNTCSRCSKKSIPCVYLPPQKRG
Links
Other
Zinc cluster
family TFs
Other
Naegleria gruberi
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
maker-nMf.1.1.scaf09276-snap-gene-0.5
Meloidogyne floridensis
maker-nMf.1.1.scaf09276-snap-gene-0.5
N
MhA1_Contig405.frz3.gene22
Meloidogyne hapla
MhA1_Contig405.frz3.gene22
N
Minc03548
Meloidogyne incognita
Minc03548
N
Minc18686
Meloidogyne incognita
Minc18686
N