fgenesh1_pg.C_chr_3.1000414 (Pichia stipitis)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 fgenesh1_pg.C_chr_3.1000414 T390010_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_chr_3.1000414 Zinc cluster 51 90

Links

Other Zinc cluster family TFs
Other Pichia stipitis TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27529.m000047 Ricinus communis 27529.m000047 N
Ca_07887 Cicer arietinum Ca_07887 N
chr4.CM0288.500.nc Lotus japonicus chr4.CM0288.500.nc N
chr6.LjT16B20.120.nc Lotus japonicus chr6.LjT16B20.120.nc N
Ciclev10014811m.g Citrus clementina Ciclev10014811m.g N
Cla014623 Citrullus lanatus Cla014623 N
Cucsa.044690 Cucumis sativus Cucsa.044690 N
Eucgr.D01435 Eucalyptus grandis Eucgr.D01435 N
evm.TU.supercontig_27.254 Carica papaya evm.TU.supercontig_27.254 N
SCL13 Arabidopsis lyrata fgenesh2_kg.7__2586__AT4G17230.1 N
GLYMA07G39650 Glycine max GLYMA07G39650 N
GLYMA09G01440 Glycine max GLYMA09G01440 N
GLYMA15G12320 Glycine max GLYMA15G12320 N
GLYMA17G01150 Glycine max GLYMA17G01150 N
Gorai.009G184100 Gossypium raimondii Gorai.009G184100 N
Gorai.010G249400 Gossypium raimondii Gorai.010G249400 N
Lus10000539.g Linum usitatissimum Lus10000539.g N
MDP0000254936 Malus domestica MDP0000254936 N
MTR_2g026250 Medicago truncatula MTR_2g026250 N
MTR_4g133660 Medicago truncatula MTR_4g133660 N
orange1.1g008984m.g Citrus sinensis orange1.1g008984m.g N
Pm012494 Prunus mume Pm012494 N
PRUPE_ppa003910mg Prunus persica PRUPE_ppa003910mg N
TCM_030393 Theobroma cacao TCM_030393 N
SCL13 Vitis vinifera VIT_00s0463g00020 N