CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh1_pg.C_scaffold_9000379
(
Mycosphaerella fijiensis
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
fgenesh1_pg.C_scaffold_9000379
T390105_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.C_scaffold_9000379
Zinc cluster
119
162
RACEACRGLKVRCDQDPAHPELPCRRCAKAGRQCIITAPSRKRQ
Links
Other
Zinc cluster
family TFs
Other
Mycosphaerella fijiensis
TFs
45 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gene20078-v1.0-hybrid
Fragaria vesca
gene20078-v1.0-hybrid
N
MDP0000216714
Malus domestica
MDP0000216714
I
Pm010673
Prunus mume
Pm010673
N
TCM_032389
Theobroma cacao
TCM_032389
N