CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.sca_1_chr1_3_0001357
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
fgenesh1_pg.sca_1_chr1_3_0001357
T390172_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.sca_1_chr1_3_0001357
Zinc cluster
90
118
STCDETKPMCFNCMRFNVPCSFDPHSPPT
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ARB_00782
Arthroderma benhamiae
ARB_00782
N
0.548
e_gw1.100.23.1
Nectria haematococca
e_gw1.100.23.1
N
0.559
MCYG_02063
Microsporum canis
MCYG_02063
N
0.546
MCYG_02063
Arthroderma otae
MCYG_02063
N
0.546
NechaG56106
Fusarium solani
NechaG56106
N
0.559
NechaG75746
Fusarium solani
NechaG75746
N
0.683
S40285_04043
Stachybotrys chlorohalonata
S40285_04043
N
0.541
V499_02453
Pseudogymnoascus pannorum
V499_02453
N
0.546
VDBG_06207
Verticillium albo atrum
VDBG_06207
N
0.542
VDBG_06207
Verticillium alfalfae
VDBG_06207
N
0.542