CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.sca_1_chr1_3_0001357
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
fgenesh1_pg.sca_1_chr1_3_0001357
T390172_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.sca_1_chr1_3_0001357
Zinc cluster
90
118
STCDETKPMCFNCMRFNVPCSFDPHSPPT
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NechaG75746
Fusarium solani
NechaG75746
N
0.683
NechaG56106
Fusarium solani
NechaG56106
N
0.559
e_gw1.100.23.1
Nectria haematococca
e_gw1.100.23.1
N
0.559
ARB_00782
Arthroderma benhamiae
ARB_00782
N
0.548
MCYG_02063
Microsporum canis
MCYG_02063
N
0.546
MCYG_02063
Arthroderma otae
MCYG_02063
N
0.546
V499_02453
Pseudogymnoascus pannorum
V499_02453
N
0.546
VDBG_06207
Verticillium albo atrum
VDBG_06207
N
0.542
VDBG_06207
Verticillium alfalfae
VDBG_06207
N
0.542
S40285_04043
Stachybotrys chlorohalonata
S40285_04043
N
0.541