fgenesh1_pm.sca_3_chr4_2_0000157 (Nectria haematococca)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 fgenesh1_pm.sca_3_chr4_2_0000157 T390351_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
col-21
M02600_2.00 		Neurospora crassa
CGGMGWTA
TAWCKCCG		 PBM
Weirauch et al.(2014)
pTH8945 		0.610 0.750
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.sca_3_chr4_2_0000157 Zinc cluster 21 58

Links

Other Zinc cluster family TFs
Other Nectria haematococca TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CFIO01_04511 Colletotrichum fioriniae CFIO01_04511 I 0.594
CH063_11230 Colletotrichum higginsianum CH063_11230 I 0.594
CHGG_08197 Chaetomium globosum CHGG_08197 I 0.642
Cob_03888 Colletotrichum orbiculare Cob_03888 I 0.642
e_gw1.2.156.1 Cryphonectria parasitica e_gw1.2.156.1 I 0.564
FGRRES_05157 Fusarium graminearum FGRRES_05157 I 0.581
FPSE_06556 Fusarium pseudograminearum FPSE_06556 I 0.581
GLRG_08668 Colletotrichum graminicola GLRG_08668 I 0.594
MYCTH_2311492 Myceliophthora thermophila MYCTH_2311492 I 0.593
col-21 Neurospora crassa NCU03489 D 0.610
NechaG92542 Fusarium solani NechaG92542 I 0.683
NEUTE1DRAFT_66044 Neurospora tetrasperma NEUTE1DRAFT_66044 I 0.562
PODANS_6_4250 Podospora anserina PODANS_6_4250 I 0.594
S40285_03084 Stachybotrys chlorohalonata S40285_03084 N 0.544
S40288_01677 Stachybotrys chartarum S40288_01677 N 0.544
SMAC_07224 Sordaria macrospora SMAC_07224 I 0.562
TRIATDRAFT_315339 Trichoderma atroviride TRIATDRAFT_315339 I 0.613
TRIVIDRAFT_229893 Trichoderma virens TRIVIDRAFT_229893 I 0.637
UCRPA7_8227 Togninia minima UCRPA7_8227 I 0.565
VDAG_07012 Verticillium dahliae VDAG_07012 I 0.575
VHEMI05522 Torrubiella hemipterigena VHEMI05522 I 0.543