CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
TRIATDRAFT_315339
(
Trichoderma atroviride
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
TRIATDRAFT_315339
T385249_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
col-21
M02600_2.00
Neurospora crassa
CGGMGWTA
TAWCKCCG
PBM
Weirauch et al.(2014)
pTH8945
0.572
0.765
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EHK48964
Zinc cluster
25
60
ISCTECHRRKQKCDRELPCGNCRSRNKETSCFYEAG
Links
Other
Zinc cluster
family TFs
Other
Trichoderma atroviride
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TRIVIDRAFT_229893
Trichoderma virens
TRIVIDRAFT_229893
I
0.630
NechaG92542
Fusarium solani
NechaG92542
I
0.613
fgenesh1_pm.sca_3_chr4_2_0000157
Nectria haematococca
fgenesh1_pm.sca_3_chr4_2_0000157
I
0.613
CHGG_08197
Chaetomium globosum
CHGG_08197
I
0.572
Cob_03888
Colletotrichum orbiculare
Cob_03888
I
0.572
PHSY_002329
Pseudozyma hubeiensis
PHSY_002329
N
0.572
UM05790
Ustilago maydis
UM05790
N
0.572
col-21
Neurospora crassa
NCU03489
D
0.572
FGRRES_05157
Fusarium graminearum
FGRRES_05157
I
0.570
FPSE_06556
Fusarium pseudograminearum
FPSE_06556
I
0.570
UCRPA7_8227
Togninia minima
UCRPA7_8227
I
0.554
e_gw1.2.156.1
Cryphonectria parasitica
e_gw1.2.156.1
I
0.553