fgenesh1_pm.sca_54_chr3_4_0000024 (Nectria haematococca)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 fgenesh1_pm.sca_54_chr3_4_0000024 T390356_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.sca_54_chr3_4_0000024 Zinc cluster 79 117

Links

Other Zinc cluster family TFs
Other Nectria haematococca TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA005516 Oryza indica BGIOSGA005516 I
BGIOSGA022518 Oryza indica BGIOSGA022518 I
BRADI1G46270 Brachypodium distachyon BRADI1G46270 I
F775_01928 Aegilops tauschii F775_01928 I
GRMZM2G033915 Zea mays GRMZM2G033915 I
GRMZM2G134552 Zea mays GRMZM2G134552 N
GRMZM2G165991 Zea mays GRMZM2G165991 I
GSMUA_Achr3G07730_001 Musa acuminata GSMUA_Achr3G07730_001 I
LjT35F01.80.nd Lotus japonicus LjT35F01.80.nd I
LPERR02G28190 Leersia perrieri LPERR02G28190 I
LPERR06G06210 Leersia perrieri LPERR06G06210 I
MLOC_17575 Hordeum vulgare MLOC_17575 I
OB06G16230 Oryza brachyantha OB06G16230 I
OBART06G06800 Oryza barthii OBART06G06800 I
OGLUM02G35430 Oryza glumaepatula OGLUM02G35430 I
OGLUM06G07170 Oryza glumaepatula OGLUM06G07170 I
OMERI02G32570 Oryza meridionalis OMERI02G32570 I
OMERI06G07980 Oryza meridionalis OMERI06G07980 I
ONIVA02G36360 Oryza nivara ONIVA02G36360 I
ONIVA06G08110 Oryza nivara ONIVA06G08110 I
OPUNC02G31650 Oryza punctata OPUNC02G31650 I
OPUNC06G06450 Oryza punctata OPUNC06G06450 I
ORGLA02G0296600 Oryza glaberrima ORGLA02G0296600 I
ORGLA06G0063300 Oryza glaberrima ORGLA06G0063300 I
ORUFI02G35820 Oryza rufipogon ORUFI02G35820 I
ORUFI06G07050 Oryza rufipogon ORUFI06G07050 I
OS02G0773600 Oryza sativa OS02G0773600 I
OS06G0207600 Oryza sativa OS06G0207600 I
Pavir.J07916 Panicum virgatum Pavir.J07916 N
Pavir.J23833 Panicum virgatum Pavir.J23833 I
Pavir.J25248 Panicum virgatum Pavir.J25248 I
PGSC0003DMG400023669 Solanum tuberosum PGSC0003DMG400023669 I
SapurV1A.0251s0220 Salix purpurea SapurV1A.0251s0220 I
SapurV1A.3188s0010 Salix purpurea SapurV1A.3188s0010 I
Sb04g034665 Sorghum bicolor Sb04g034665 N
Sb10g006810 Sorghum bicolor Sb10g006810 I
Si019733m.g Setaria italica Si019733m.g N
Solyc10g080530.1 Solanum lycopersicum Solyc10g080530.1 I