CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.C_scaffold_5000298
(
Neurospora discreta
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
fgenesh2_pg.C_scaffold_5000298
T390370_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU00344
M02585_2.00
Neurospora crassa
NNNCGGNNNN
NNNNCCGNNN
PBM
Weirauch et al.(2014)
pTH9657
0.643
0.947
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.C_scaffold_5000298
Zinc cluster
64
108
TACIRCRDSKVRCNASLSPGKPCLRCTKLDLECIVDKNYKRASKK
Links
Other
Zinc cluster
family TFs
Other
Neurospora discreta
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GH19135
Drosophila grimshawi
FBgn0126602
N