CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NCU00344
(
Neurospora crassa
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
NCU00344
T390564_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU00344
M02585_2.00
Neurospora crassa
NNNCGGNNNN
NNNNCCGNNN
PBM
Weirauch et al.(2014)
pTH9657
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.537
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02585_2.00
Zinc cluster
52
96
TACIKCRDSKVRCNASLTPGQPCLRCTKLDLECIVDKNYKRASKK
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCU00344.1
Zinc cluster
64
108
TACIKCRDSKVRCNASLTPGQPCLRCTKLDLECIVDKNYKRASKK
NCU00344.2
Zinc cluster
64
108
TACIKCRDSKVRCNASLTPGQPCLRCTKLDLECIVDKNYKRASKK
Links
Other
Zinc cluster
family TFs
Other
Neurospora crassa
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NEUTE1DRAFT_100922
Neurospora tetrasperma
NEUTE1DRAFT_100922
I
0.683
SMAC_06478
Sordaria macrospora
SMAC_06478
I
0.644
fgenesh2_pg.C_scaffold_5000298
Neurospora discreta
fgenesh2_pg.C_scaffold_5000298
I
0.643