11686_YJL103C (Saccharomyces paradoxus)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 11686_YJL103C T390738_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GSM1
M01583_2.00 		Saccharomyces cerevisiae
NCGGVVNNNN
NNNNBBCCGN		 PBM
Zhu et al.(2009)
Gsm1 		0.683 1.000
GSM1
M00090_2.00 		Saccharomyces cerevisiae
DYYCCGGRRH
DYYCCGGRRH		 PBM
Badis et al.(2008)
YJL103C_4534 		0.683 1.000
GSM1
M08671_2.00 		Saccharomyces cerevisiae
NNHNBTCCGGAGNTWNNHNNN
NNNDNNWANCTCCGGAVNDNN		 Misc
DeBoer et al.(2011)
YJL103C_856 		0.683 1.000
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
11686_YJL103C Zinc cluster 44 84

Links

Other Zinc cluster family TFs
Other Saccharomyces paradoxus TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA032902 Oryza indica BGIOSGA032902 N
BGIOSGA032906 Oryza indica BGIOSGA032906 N
OBART10G09850 Oryza barthii OBART10G09850 N
OGLUM10G09710 Oryza glumaepatula OGLUM10G09710 N
OLONG_014466 Oryza longistaminata OLONG_014466 N
ONIVA10G09240 Oryza nivara ONIVA10G09240 N
ORGLA10G0084900 Oryza glaberrima ORGLA10G0084900 N
ORUFI10G10350 Oryza rufipogon ORUFI10G10350 N
OS10G0413900 Oryza sativa OS10G0413900 N