GSM1 (Saccharomyces cerevisiae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 YJL103C T388354_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GSM1
M00090_2.00		 Saccharomyces cerevisiae
DYYCCGGRRH
DYYCCGGRRH		 PBM
Badis et al.(2008)
YJL103C_4534		 (Direct) (Direct)
GSM1
M01583_2.00		 Saccharomyces cerevisiae
NCGGVVNNNN
NNNNBBCCGN		 PBM
Zhu et al.(2009)
Gsm1		 (Direct) (Direct)
GSM1
M08671_2.00		 Saccharomyces cerevisiae
NNHNBTCCGGAGNTWNNHNNN
NNNDNNWANCTCCGGAVNDNN		 Misc
DeBoer et al.(2011)
YJL103C_856		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.537 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00090_2.00 Zinc cluster 17 57
M01583_2.00 Zinc cluster 18 58

DNA Binding Domains

Protein ID Domain From To Sequence
YJL103C Zinc cluster 18 58

Links

Other Zinc cluster family TFs
Other Saccharomyces cerevisiae TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SKUD_195408 Saccharomyces kudriavzevii SKUD_195408 I 0.683
SU7_1749 Saccharomyces arboricola SU7_1749 I 0.683
11686_YJL103C Saccharomyces paradoxus 11686_YJL103C I 0.683
11804_Multiple Saccharomyces mikatae 11804_Multiple I 0.683
12667_YJL103C Saccharomyces bayanus 12667_YJL103C I 0.683
TDEL_0H01310 Torulaspora delbrueckii TDEL_0H01310 I 0.561
ZYRO0F01804g Zygosaccharomyces rouxii ZYRO0F01804g I 0.540