12667_YJL103C (Saccharomyces bayanus)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 12667_YJL103C T390746_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GSM1
M01583_2.00 		Saccharomyces cerevisiae
NCGGVVNNNN
NNNNBBCCGN		 PBM
Zhu et al.(2009)
Gsm1 		0.683 0.949
GSM1
M00090_2.00 		Saccharomyces cerevisiae
DYYCCGGRRH
DYYCCGGRRH		 PBM
Badis et al.(2008)
YJL103C_4534 		0.683 0.949
GSM1
M08671_2.00 		Saccharomyces cerevisiae
NNHNBTCCGGAGNTWNNHNNN
NNNDNNWANCTCCGGAVNDNN		 Misc
DeBoer et al.(2011)
YJL103C_856 		0.683 0.949
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
12667_YJL103C Zinc cluster 18 58

Links

Other Zinc cluster family TFs
Other Saccharomyces bayanus TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OLONG_024792 Oryza longistaminata OLONG_024792 N
Traes_2DL_C8C8B8DA9 Triticum aestivum Traes_2DL_C8C8B8DA9 N
Traes_3AL_D098A5241 Triticum aestivum Traes_3AL_D098A5241 N