18903_YMR168C (Saccharomyces bayanus)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 18903_YMR168C T390797_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CEP3
M00101_2.00 		Saccharomyces cerevisiae
BCTCGGRA
TYCCGAGV		 PBM
Badis et al.(2008)
CEP3_2090 		0.549 0.865
CEP3
M01591_2.00 		Saccharomyces cerevisiae
YTCGGAAA
TTTCCGAR		 PBM
Zhu et al.(2009)
Cep3 		0.549 0.865
CEP3
M07528_2.00 		Saccharomyces cerevisiae
YTCGGAAN
NTTCCGAR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0282.1 		0.549 0.865
CEP3
M08687_2.00 		Saccharomyces cerevisiae
YTCGGAAN
NTTCCGAR		 Misc
DeBoer et al.(2011)
YMR168C_524 		0.549 0.865
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
18903_YMR168C Zinc cluster 12 50

Links

Other Zinc cluster family TFs
Other Saccharomyces bayanus TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
zf(c2h2)-130 Ciona intestinalis ENSCING00000003615 N
ENSCSAVG00000001241 Ciona savignyi ENSCSAVG00000001241 N
ENSGACG00000013377 Gasterosteus aculeatus ENSGACG00000013377 N
ENSGMOG00000018496 Gadus morhua ENSGMOG00000018496 N