19960_YOL089C (Saccharomyces paradoxus)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 19960_YOL089C T390805_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HAL9
M00104_2.00 		Saccharomyces cerevisiae
NCGGVDN
NHBCCGN		 PBM
Badis et al.(2008)
HAL9_2041 		0.683 1.000
HAL9
M01593_2.00 		Saccharomyces cerevisiae
NCGGVDNN
NNHBCCGN		 PBM
Zhu et al.(2009)
Hal9 		0.683 1.000
HAL9
M07531_2.00 		Saccharomyces cerevisiae
CGGAR
YTCCG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0311.1 		0.683 1.000
HAL9
M08690_2.00 		Saccharomyces cerevisiae
TCCGNNNNNNNNNNCGGA
TCCGNNNNNNNNNNCGGA		 Misc
DeBoer et al.(2011)
YOL089C_799 		0.683 1.000
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
19960_YOL089C Zinc cluster 134 173

Links

Other Zinc cluster family TFs
Other Saccharomyces paradoxus TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
22948_YPR186C Saccharomyces mikatae 22948_YPR186C I
26175_YPR186C Saccharomyces bayanus 26175_YPR186C I
SKUD_152903 Saccharomyces kudriavzevii SKUD_152903 I
PZF1 Saccharomyces cerevisiae YPR186C D